Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1409
(665 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 102 3e-22
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 63 1e-10
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 57 1e-08
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 57 1e-08
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 45 4e-05
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 45 6e-05
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 45 6e-05
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 45 6e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 44 7e-05
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 44 7e-05
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 40 0.002
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 39 0.003
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 39 0.003
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 39 0.004
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 39 0.004
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 38 0.005
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 38 0.006
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 37 0.011
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 37 0.011
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 37 0.015
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 37 0.015
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 37 0.015
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 37 0.015
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 37 0.015
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 37 0.015
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 36 0.020
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 36 0.020
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 36 0.020
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 36 0.026
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 36 0.026
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 36 0.026
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 35 0.045
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 35 0.045
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 35 0.060
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 35 0.060
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 35 0.060
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.079
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 34 0.079
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 34 0.079
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 34 0.10
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 33 0.24
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 33 0.24
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 33 0.24
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 32 0.42
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 29 2.2
AF025458-2|AAB70978.1| 557|Caenorhabditis elegans Hypothetical ... 29 3.9
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 102 bits (244), Expect = 3e-22
Identities = 52/114 (45%), Positives = 73/114 (64%)
Frame = +1
Query: 256 DEQDTKEDDSEKKSNNDLPGSSLCLGILSDQKFTALEGTVCEPTLLGIKDMGFITMTEIQ 435
+E+D +E + E+K + + L+ F +LEG V L ++ +GF TMTEIQ
Sbjct: 36 EEEDEEEVEEEQKHQTEESSETKVSEFLTKTTFASLEGKVNANLLKAVQGLGFTTMTEIQ 95
Query: 436 AKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLIYKLKFXPRNGTGVIILXPT 597
AK+I PLLEG D++ +AKTGSGKT PAI+L++KL + NGTGVII+ PT
Sbjct: 96 AKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPT 149
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 597 RELSMQTFGVLMELMKYHHHTYG 665
RELSMQT+GVL EL++ + TYG
Sbjct: 150 RELSMQTYGVLSELLEGSNLTYG 172
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 63.3 bits (147), Expect = 1e-10
Identities = 32/71 (45%), Positives = 43/71 (60%)
Frame = +1
Query: 385 TLLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLIYKLKFXPR 564
TL G+KD + TEIQ I L G D+VGAAKTGSGKT P ++ +++ K+ P
Sbjct: 87 TLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPD 146
Query: 565 NGTGVIILXPT 597
G G +I+ PT
Sbjct: 147 YGLGALIISPT 157
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 57.2 bits (132), Expect = 1e-08
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = +1
Query: 256 DEQDTKEDDSEKKSNNDLPGS-SLCLGILSDQKFTALEGTVCEPTLLGIKDMGFITMTEI 432
+E+ E+ E KS++D P + ++ +KF+ L VC ++ M T T +
Sbjct: 58 EEESEGEEGDEFKSSDDTPKPIQISEDNMTTKKFSQLG--VCSWITQQLQTMQIKTATPV 115
Query: 433 QAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLIYKLKFXPRNGTGVIILXPT 597
QA IP +LEG D++G A+TG+GKT AI ++ KL P G +IL PT
Sbjct: 116 QAACIPKILEGSDILGCARTGTGKTLAF---AIPILQKLSVDP-YGIYALILTPT 166
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 57.2 bits (132), Expect = 1e-08
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = +1
Query: 256 DEQDTKEDDSEKKSNNDLPGS-SLCLGILSDQKFTALEGTVCEPTLLGIKDMGFITMTEI 432
+E+ E+ E KS++D P + ++ +KF+ L VC ++ M T T +
Sbjct: 58 EEESEGEEGDEFKSSDDTPKPIQISEDNMTTKKFSQLG--VCSWITQQLQTMQIKTATPV 115
Query: 433 QAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLIYKLKFXPRNGTGVIILXPT 597
QA IP +LEG D++G A+TG+GKT AI ++ KL P G +IL PT
Sbjct: 116 QAACIPKILEGSDILGCARTGTGKTLAF---AIPILQKLSVDP-YGIYALILTPT 166
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 397 IKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAI-DLIYKLKFXPRNGT 573
+K + T IQA+AIP ++ G D++G AKTGSGKT P ++ + + +G
Sbjct: 319 LKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGP 378
Query: 574 GVIILXPT 597
+IL PT
Sbjct: 379 IAVILAPT 386
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 424 TEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAI-DLIYKLKFXPRNGTGVIILXPT 597
T IQA AIP L G D++G AKTGSGKT +PAI ++ + G +I+ PT
Sbjct: 289 TPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPT 347
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +1
Query: 397 IKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLIYKLKFXPRNGTG 576
I+ GF T IQ K IP +++G D+V ++TGSGKT I ++ KLK G
Sbjct: 39 IEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAF---VIPMLQKLKRRDTTGIR 95
Query: 577 VIILXPT 597
+++ PT
Sbjct: 96 ALMVSPT 102
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +1
Query: 397 IKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLIYKLKFXPRNGTG 576
I+ GF T IQ K IP +++G D+V ++TGSGKT I ++ KLK G
Sbjct: 39 IEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAF---VIPMLQKLKRRDTTGIR 95
Query: 577 VIILXPT 597
+++ PT
Sbjct: 96 ALMVSPT 102
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 44.4 bits (100), Expect = 7e-05
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Frame = +1
Query: 343 DQKFTALEGTVCEPTLLG-IKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS* 519
D + T+ + PT+L +K + + + IQ IP +L+G D++G A+T +GKT
Sbjct: 377 DVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFG 436
Query: 520 YPAIDLIYKLKFXPRN------GTGVIILXPT 597
P ID I ++ RN G +IL PT
Sbjct: 437 LPIIDKILRMDEETRNKARQDDGPLALILAPT 468
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 44.4 bits (100), Expect = 7e-05
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +1
Query: 400 KDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YP----AIDLIYKLKFXPRN 567
K G +T T IQ + IP L G D++G A TGSGKT P ++ KL F
Sbjct: 206 KQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSE 265
Query: 568 GTGVIILXPT 597
G +I+ P+
Sbjct: 266 GPFGLIIVPS 275
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Frame = +1
Query: 397 IKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLIYKLKFXPRN--- 567
+K++G++ T IQ +AIP L+ D++G A+TGSGKT P + I L R
Sbjct: 316 VKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHR 375
Query: 568 --GTGVIILXPT 597
G II+ PT
Sbjct: 376 DLGPYAIIMAPT 387
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +1
Query: 373 VCEPTLLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKT 507
V +P + +G++ ++IQ A+P L+G D++G A+TGSGKT
Sbjct: 51 VSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKT 95
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 424 TEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLIYKLKFXPR-NGTGVIILXPT 597
T IQ+ + P + G D++ AKTGSGKT PA+ I K R G V++L PT
Sbjct: 153 TVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPT 211
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 388 LLGIKDMGFITMTEIQAKAIPPLL-EGXDLVGAAKTGSGKT 507
L I+ MGF TEIQ+ +P + + D++GAA+TGSGKT
Sbjct: 167 LEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKT 207
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/73 (35%), Positives = 39/73 (53%)
Frame = +1
Query: 379 EPTLLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLIYKLKFX 558
E L GI GF + IQ +AIP +L+ D++ A++G+GKT +I ++ L
Sbjct: 35 EDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATF---SISVLQSLDTQ 91
Query: 559 PRNGTGVIILXPT 597
R T +IL PT
Sbjct: 92 VRE-TQALILSPT 103
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = +1
Query: 382 PTLLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLIYKLKFXP 561
P LL + D + + T++Q + LL D+V + TGSGKT P + +I K P
Sbjct: 19 PELLEVFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQP 78
Query: 562 RNGTGVIILXPT 597
+ G +IL P+
Sbjct: 79 AD-IGALILSPS 89
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/73 (34%), Positives = 39/73 (53%)
Frame = +1
Query: 379 EPTLLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLIYKLKFX 558
E L GI GF + IQ +A+P +L+ D++ A++G+GKT +I ++ L
Sbjct: 35 EDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATF---SISVLQSLDTQ 91
Query: 559 PRNGTGVIILXPT 597
R T +IL PT
Sbjct: 92 VRE-TQALILSPT 103
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +1
Query: 397 IKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLI 540
IK G+ T +Q +IP L G DL+ A+TGSGKT P ++ I
Sbjct: 181 IKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAI 228
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 409 GFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAID-LIYKLKFXPRNGTGVII 585
G+ T IQ IP L G D+ A TG+GKT P ++ +IY+ K + T V++
Sbjct: 167 GYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRPK--GASCTRVLV 224
Query: 586 LXPT 597
L PT
Sbjct: 225 LVPT 228
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +1
Query: 397 IKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAI 531
I+ GF + IQ++ P LL G D +G ++TGSGKT PA+
Sbjct: 99 IRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPAL 143
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +1
Query: 397 IKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLIYK 546
+ + + T +Q++AIP +L G D + AA+TGSGKT P ++++
Sbjct: 17 LSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQIVWE 66
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +1
Query: 379 EPTLLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKT 507
E L GI GF + IQ +AI P G D++ A++G+GKT
Sbjct: 38 EELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKT 80
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 355 TALEGTVCEPTLLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKT 507
T E + E + G+ T IQ A+P + +G D++ A+TGSGKT
Sbjct: 342 TFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKT 392
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +1
Query: 379 EPTLLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKT 507
E L GI GF + IQ +AI P G D++ A++G+GKT
Sbjct: 38 EELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKT 80
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 355 TALEGTVCEPTLLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKT 507
T E + E + G+ T IQ A+P + +G D++ A+TGSGKT
Sbjct: 342 TFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKT 392
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +1
Query: 379 EPTLLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAID-LIYKLKF 555
E L I ++G+ ++Q I LE +++G A+TGSGKT P + LI + K
Sbjct: 98 ERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKT 157
Query: 556 XPRN-GTGVIILXPTE 600
+ G +I+ PT+
Sbjct: 158 NDGSVGPSAVIIAPTK 173
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 355 TALEGTVCEPTLLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKT 507
T E + E + G+ T IQ A+P + +G D++ A+TGSGKT
Sbjct: 342 TFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKT 392
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 36.3 bits (80), Expect = 0.020
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 LSDEQDTKEDDSEKKSNNDLPGSSLCLGILSDQKFTALEGTVCEPTLL-GIKDMGFITMT 426
L D ++ +E+ +K+ + G + + + +P +L I D GF +
Sbjct: 6 LLDYEEEQEEIQDKQPEVGGGDARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPS 65
Query: 427 EIQAKAIPPLLEGXDLVGAAKTGSGKT 507
E+Q + IP + G D+V AK+G GKT
Sbjct: 66 EVQHECIPQAILGMDVVCQAKSGMGKT 92
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 36.3 bits (80), Expect = 0.020
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 LSDEQDTKEDDSEKKSNNDLPGSSLCLGILSDQKFTALEGTVCEPTLL-GIKDMGFITMT 426
L D ++ +E+ +K+ + G + + + +P +L I D GF +
Sbjct: 6 LLDYEEEQEEIQDKQPEVGGGDARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPS 65
Query: 427 EIQAKAIPPLLEGXDLVGAAKTGSGKT 507
E+Q + IP + G D+V AK+G GKT
Sbjct: 66 EVQHECIPQAILGMDVVCQAKSGMGKT 92
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 36.3 bits (80), Expect = 0.020
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 LSDEQDTKEDDSEKKSNNDLPGSSLCLGILSDQKFTALEGTVCEPTLL-GIKDMGFITMT 426
L D ++ +E+ +K+ + G + + + +P +L I D GF +
Sbjct: 5 LLDYEEEQEEIQDKQPEVGGGDARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPS 64
Query: 427 EIQAKAIPPLLEGXDLVGAAKTGSGKT 507
E+Q + IP + G D+V AK+G GKT
Sbjct: 65 EVQHECIPQAILGMDVVCQAKSGMGKT 91
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 35.9 bits (79), Expect = 0.026
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +1
Query: 409 GFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLI 540
G+ T +Q +IP LL DL+ A+TGSGKT P I I
Sbjct: 158 GYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHI 201
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 35.9 bits (79), Expect = 0.026
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +1
Query: 409 GFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLI 540
G+ T +Q +IP LL DL+ A+TGSGKT P I I
Sbjct: 142 GYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHI 185
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 35.9 bits (79), Expect = 0.026
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +1
Query: 409 GFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLI 540
G+ T +Q +IP LL DL+ A+TGSGKT P I I
Sbjct: 139 GYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHI 182
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 35.1 bits (77), Expect = 0.045
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +1
Query: 379 EPTLLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKT 507
+ TL +K+ F + +QA+AIP L G D++ AK+G+GKT
Sbjct: 31 QKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKT 73
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 35.1 bits (77), Expect = 0.045
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +1
Query: 379 EPTLLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKT 507
+ TL +K+ F + +QA+AIP L G D++ AK+G+GKT
Sbjct: 31 QKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKT 73
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.060
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 355 TALEGTVCEPTLLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKT 507
T E + E + G+ T IQ +P + +G D++ A+TGSGKT
Sbjct: 553 TFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKT 603
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.060
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 355 TALEGTVCEPTLLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKT 507
T E + E + G+ T IQ +P + +G D++ A+TGSGKT
Sbjct: 553 TFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKT 603
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.060
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 355 TALEGTVCEPTLLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKT 507
T E + E + G+ T IQ +P + +G D++ A+TGSGKT
Sbjct: 553 TFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKT 603
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 34.3 bits (75), Expect = 0.079
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 382 PTLLG-IKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLIYKLK 552
P+LL + + + IQ ++IP + E +++ +A TGSGKT P ID I +LK
Sbjct: 135 PSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEILELK 192
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 34.3 bits (75), Expect = 0.079
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 397 IKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKT 507
++ G+ T IQ +P + +G D++ A+TGSGKT
Sbjct: 313 VERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKT 349
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 34.3 bits (75), Expect = 0.079
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 397 IKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKT 507
++ G+ T IQ +P + +G D++ A+TGSGKT
Sbjct: 313 VERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKT 349
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1
Query: 388 LLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLI 540
L+GI + G+ + IQ +I L G D++ AK G+GKT P I+ I
Sbjct: 55 LMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI 105
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 379 EPTLLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKT 507
E L GI GF + IQ A+ P G D+ ++ GSGKT
Sbjct: 5 EELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKT 47
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 397 IKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKT 507
+K M T IQ + P++ G D+V A TGSGKT
Sbjct: 751 LKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKT 787
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 397 IKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKT 507
+K M T IQ + P++ G D+V A TGSGKT
Sbjct: 751 LKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKT 787
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 412 FITMTEIQAKAIPPLL-EGXDLVGAAKTGSGKT 507
F TEIQ+ +P + + D++GAA+TGSGKT
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKT 40
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 31.9 bits (69), Expect = 0.42
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 415 ITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAI 531
+ + Q + + P LEG + V A TGSGKT+ + Y A+
Sbjct: 369 LVLRTYQEELVQPALEGKNCVIVAPTGSGKTEVAIYAAL 407
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1
Query: 397 IKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAIDLIYK 546
+K + T +Q +I + EG LV A TG GKT PAI+ K
Sbjct: 108 LKCVHVTTFNAVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALK 157
>AF025458-2|AAB70978.1| 557|Caenorhabditis elegans Hypothetical
protein C01B12.5 protein.
Length = 557
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 311 LDQASA*VYYQIKNSLHWKAQCANQLF*ELKIWAL 415
LD A++ ++ QIK L WK ++ EL IW L
Sbjct: 7 LDVATSGLFTQIKVLLRWKGSVWKSIWSELLIWLL 41
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,681,850
Number of Sequences: 27780
Number of extensions: 208184
Number of successful extensions: 647
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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