Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1408
         (628 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   117   4e-28
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   1.5  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   4.5  
U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    23   6.0  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.9  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  117 bits (281), Expect = 4e-28
 Identities = 51/85 (60%), Positives = 64/85 (75%)
 Frame = +3

Query: 255 SSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALP 434
           S++   KDKFQ+NLDVQ F+PEEISVK  D  ++VEGKHEEK+D HGY+SR F RRY LP
Sbjct: 6   SAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRYMLP 65

Query: 435 EGCTAESVESRLSSDGVLSVIAPRK 509
           +G     + S LSSDG+L++  PRK
Sbjct: 66  KGHNEADIVSSLSSDGILTITCPRK 90


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 618  LTDLKPCRRWIGPSPPCARVRVWAIGILRSPSTA 517
            L  + PC RW+  SP    VR+ A G  R+ +T+
Sbjct: 1372 LATVVPCDRWLTGSPFFCSVRLIAEGQKRTLATS 1405


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
 Frame = +3

Query: 300 VQHFAPEEISVKTADGYIVVEGKH---------EEKKDQHGYISRQFTRRYALPEGCTAE 452
           ++ + PEE +V  ++ + +V+G+          E + ++  Y S    +  +     ++ 
Sbjct: 68  IEKYCPEEYTVDPSNTFQLVQGRELTKPSRRVLEGQSERESYYSSSHYQSSSSSSSSSSF 127

Query: 453 SVESRLSSDGVLSV--IAPRKCRQQWRVNARFR 545
              S  S  G  S+  I+P++   + R+N  FR
Sbjct: 128 QQSSYESESGAGSIVQISPQRVSLKLRLNEAFR 160


>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -1

Query: 568 RTGPGLGDRNLAFTLHCWRHFLGAIT-DNTPSEDSRD 461
           RT P  G R     L   RH LGA+T D+   ++SRD
Sbjct: 10  RTRPARGVRREPAVLVLVRH-LGALTGDSKSQQESRD 45


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 396 YISRQFTRRYALPEGCTAESVESRLSSDGVLSVIAP 503
           Y+S +F     +P+GC    +   L  + V +V+ P
Sbjct: 661 YLSEEFFCTSGVPQGCVLSPLLFSLFINDVCNVLPP 696


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,706
Number of Sequences: 2352
Number of extensions: 14804
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)