Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1404
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   116   5e-28
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   6.6  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   8.8  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  116 bits (279), Expect = 5e-28
 Identities = 51/85 (60%), Positives = 63/85 (74%)
 Frame = +3

Query: 255 SSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIXVEGKHEEKKDQHGYISRQFTRRYALP 434
           S++   KDKFQ+NLDVQ F+PEEISVK  D  + VEGKHEEK+D HGY+SR F RRY LP
Sbjct: 6   SAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRYMLP 65

Query: 435 EGCTAESVESRLSSDGVLSVIAPRK 509
           +G     + S LSSDG+L++  PRK
Sbjct: 66  KGHNEADIVSSLSSDGILTITCPRK 90


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 396 YISRQFTRRYALPEGCTAESVESRLSSDGVLSVIAP 503
           Y+S +F     +P+GC    +   L  + V +V+ P
Sbjct: 661 YLSEEFFCTSGVPQGCVLSPLLFSLFINDVCNVLPP 696


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 144 RLGADSGRFSQCCSRPPCEQRILPPVASPCCRGSR 248
           R+     +FSQ   +  CEQ+ LP V S  C G++
Sbjct: 347 RMAKSKRKFSQ---QNCCEQQHLPHVHSEKCAGTQ 378


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,582
Number of Sequences: 2352
Number of extensions: 11742
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)