Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1392
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    25   0.58 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   3.1  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    21   7.1  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   9.4  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   9.4  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 368 NYVEKNKYDNIVVLDHSFA 424
           NY E+NK D IV+L  +++
Sbjct: 284 NYAEENKRDEIVLLTEAYS 302


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 415 FFRIRHVQTIYLQSNNXAF 471
           F R+ H++ +YLQ+N   F
Sbjct: 862 FERLSHLRELYLQNNLIGF 880


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 197 FFIAVILVIQYF 162
           FF++VIL+  YF
Sbjct: 10  FFLSVILITSYF 21


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/13 (38%), Positives = 8/13 (61%)
 Frame = +1

Query: 397 YCCSRPFFRIRHV 435
           YCC   + + RH+
Sbjct: 92  YCCRESYLKERHI 104


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/13 (38%), Positives = 8/13 (61%)
 Frame = +1

Query: 397 YCCSRPFFRIRHV 435
           YCC   + + RH+
Sbjct: 92  YCCRESYLKERHI 104


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,711
Number of Sequences: 438
Number of extensions: 1484
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)