Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1387
         (499 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1115 + 31008213-31008707,31009385-31009689,31010848-310111...    27   6.3  
09_04_0438 + 17590959-17591267,17592137-17592227,17592405-175925...    27   8.4  

>04_04_1115 +
           31008213-31008707,31009385-31009689,31010848-31011108,
           31011193-31011401,31011490-31011783,31011861-31011901,
           31011987-31012055,31012164-31012264,31012351-31012435,
           31012539-31012637,31012731-31012799,31012909-31013040,
           31013128-31013222,31013340-31013421
          Length = 778

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 17/53 (32%), Positives = 21/53 (39%)
 Frame = -3

Query: 482 DPRAISEKLWTXSALXWLRSIV*EQS*NRLVLDVFKWSQCLACQRGTSRQPXL 324
           D  A+S +LW    L W   I      N L +D   W+ C A      R P L
Sbjct: 156 DAAAVSYRLWVNGCLSWGDKIA-HGFYNILGVDPHVWAMCNAAAEDGRRLPTL 207


>09_04_0438 +
           17590959-17591267,17592137-17592227,17592405-17592559,
           17592866-17592893,17592953-17593091,17593587-17593668
          Length = 267

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 253 REEIIXALKEENERLLGKIRCVENSGTATEDPDGAKNE 140
           R E + ++ EE  R L ++R     G    DP+GA N+
Sbjct: 24  RREALESVLEELRRALDELRECGELGVPLPDPEGAVND 61


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,854,119
Number of Sequences: 37544
Number of extensions: 142388
Number of successful extensions: 253
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 253
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)