Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1385
         (622 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028423-1|AAK27730.1|  852|Homo sapiens PRIP-interacting protei...    33   0.81 
AF432215-1|AAL99922.1|  853|Homo sapiens CLL-associated antigen ...    33   0.81 
AF286340-1|AAK83025.1|  853|Homo sapiens hepatocellular carcinom...    33   0.81 
CR456920-1|CAG33201.1|  128|Homo sapiens NDUFB6 protein.               30   7.6  
BC029247-1|AAH29247.1|  128|Homo sapiens NADH dehydrogenase (ubi...    30   7.6  
BC009801-1|AAH09801.1|  128|Homo sapiens NADH dehydrogenase (ubi...    30   7.6  
AL353671-8|CAH71257.1|  128|Homo sapiens NADH dehydrogenase (ubi...    30   7.6  
AL353671-7|CAH71258.1|  113|Homo sapiens NADH dehydrogenase (ubi...    30   7.6  
AF035840-1|AAC68838.1|  128|Homo sapiens NADH:ubiquinone oxidore...    30   7.6  

>AY028423-1|AAK27730.1|  852|Homo sapiens PRIP-interacting protein
           PIPMT protein.
          Length = 852

 Score = 33.1 bits (72), Expect = 0.81
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = +2

Query: 101 ERAWRKQWLKDQVLAAHEPVHVEEYWRERT 190
           + +WRK++ +D +LA+ +P  +E+Y   RT
Sbjct: 139 QESWRKEYEEDDILASDDPSSIEQYENTRT 168


>AF432215-1|AAL99922.1|  853|Homo sapiens CLL-associated antigen
           KW-2 protein.
          Length = 853

 Score = 33.1 bits (72), Expect = 0.81
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = +2

Query: 101 ERAWRKQWLKDQVLAAHEPVHVEEYWRERT 190
           + +WRK++ +D +LA+ +P  +E+Y   RT
Sbjct: 139 QESWRKEYEEDDILASDDPSSIEQYENTRT 168


>AF286340-1|AAK83025.1|  853|Homo sapiens hepatocellular
           carcinoma-associated antigen 137 protein.
          Length = 853

 Score = 33.1 bits (72), Expect = 0.81
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = +2

Query: 101 ERAWRKQWLKDQVLAAHEPVHVEEYWRERT 190
           + +WRK++ +D +LA+ +P  +E+Y   RT
Sbjct: 139 QESWRKEYEEDDILASDDPSSIEQYENTRT 168


>CR456920-1|CAG33201.1|  128|Homo sapiens NDUFB6 protein.
          Length = 128

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 104 RAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLD 226
           R  R++WLKDQ L+  EPV       ++  P+ +F+ K L+
Sbjct: 16  RELRRRWLKDQELSPREPVLPP----QKMGPMEKFWNKFLE 52


>BC029247-1|AAH29247.1|  128|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 6, 17kDa protein.
          Length = 128

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 104 RAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLD 226
           R  R++WLKDQ L+  EPV       ++  P+ +F+ K L+
Sbjct: 16  RELRRRWLKDQELSPREPVLPP----QKMGPMEKFWNKFLE 52


>BC009801-1|AAH09801.1|  128|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 6, 17kDa protein.
          Length = 128

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 104 RAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLD 226
           R  R++WLKDQ L+  EPV       ++  P+ +F+ K L+
Sbjct: 16  RELRRRWLKDQELSPREPVLPP----QKMGPMEKFWNKFLE 52


>AL353671-8|CAH71257.1|  128|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 6, 17kDa protein.
          Length = 128

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 104 RAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLD 226
           R  R++WLKDQ L+  EPV       ++  P+ +F+ K L+
Sbjct: 16  RELRRRWLKDQELSPREPVLPP----QKMGPMEKFWNKFLE 52


>AL353671-7|CAH71258.1|  113|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 6, 17kDa protein.
          Length = 113

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 104 RAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLD 226
           R  R++WLKDQ L+  EPV       ++  P+ +F+ K L+
Sbjct: 16  RELRRRWLKDQELSPREPVLPP----QKMGPMEKFWNKFLE 52


>AF035840-1|AAC68838.1|  128|Homo sapiens NADH:ubiquinone
           oxidoreductase B17 subunit protein.
          Length = 128

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 104 RAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLD 226
           R  R++WLKDQ L+  EPV       ++  P+ +F+ K L+
Sbjct: 16  RELRRRWLKDQELSPREPVLPP----QKMGPMEKFWNKFLE 52


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,672,499
Number of Sequences: 237096
Number of extensions: 2084681
Number of successful extensions: 4043
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4043
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)