Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1384
         (469 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0951 - 9471391-9471597,9471857-9471966,9473173-9473278,947...    28   4.3  
06_03_0601 - 22650370-22650623,22650786-22650792                       27   5.7  

>12_01_0951 -
           9471391-9471597,9471857-9471966,9473173-9473278,
           9474719-9475060,9475598-9475647,9476745-9477717
          Length = 595

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +1

Query: 79  RGETY-TGGCMGPXGARLWLXLGFV 150
           +G  Y TGGC GP   R W+  G++
Sbjct: 314 QGNPYLTGGCQGPGLQRKWIGAGWI 338


>06_03_0601 - 22650370-22650623,22650786-22650792
          Length = 86

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 79 EPVHLXPNXPXSXTGWPSHHXH 14
          EP+H  P  P    G PSH+ H
Sbjct: 16 EPIHEGPEKPIEPPGPPSHNLH 37


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,959,347
Number of Sequences: 37544
Number of extensions: 151565
Number of successful extensions: 263
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 263
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)