Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1384
         (469 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024865-1|AAF60878.1|  157|Caenorhabditis elegans Hypothetical ...    99   2e-21
Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical pr...    29   1.3  
Z73898-7|CAA98070.1|  577|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>AC024865-1|AAF60878.1|  157|Caenorhabditis elegans Hypothetical
           protein Y74C10AL.2 protein.
          Length = 157

 Score = 98.7 bits (235), Expect = 2e-21
 Identities = 46/97 (47%), Positives = 62/97 (63%)
 Frame = +1

Query: 25  VMATLSMXMXNSVXNAQVRGETYTGGCMGPXGARLWLXLGFVVGXASLIAACWILFANYV 204
           V +T++M M N++ N+QVRGE+   G +G  G+RLWL   FVV  ASL+AA WILF++YV
Sbjct: 60  VASTVAMFMVNAISNSQVRGESLHEGLLGTKGSRLWLMAAFVVSFASLVAATWILFSDYV 119

Query: 205 XARSXKHAXAGVGXDHANAFIIAGSLVFKFGRTEDLW 315
             +       GV     N  I A S V+KFGRTE++W
Sbjct: 120 LIQGSHSVWPGVALFLTNFIIFASSCVYKFGRTEEMW 156


>Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical
           protein ZC518.2 protein.
          Length = 984

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
 Frame = -3

Query: 275 PAIMKALA*SQPTPAQACLXDLAXT*FAXSIQQAAMRDAXPTTNPXXSQSLA-PXGPMQP 99
           P I  ALA ++P P  A     A T      QQ A R   P   P  SQ    P  P Q 
Sbjct: 150 PPIPSALASARPAPFPAAQPPPAPTPTPSYQQQMAPRPQAPAAYPPASQQQGYPPQPQQN 209

Query: 98  PVYVSPR 78
             Y  P+
Sbjct: 210 SQYGQPQ 216


>Z73898-7|CAA98070.1|  577|Caenorhabditis elegans Hypothetical
           protein ZK822.5a protein.
          Length = 577

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 118 GARLWLXLGFVVGXASLIAACWI 186
           GA++WL   FV+G AS I  C++
Sbjct: 85  GAQIWL--NFVIGVASSIVTCFV 105


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,354,596
Number of Sequences: 27780
Number of extensions: 126590
Number of successful extensions: 272
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)