Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1379
(648 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 27 0.16
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 24 1.1
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 24 1.1
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 24 1.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.5
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 3.4
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 22 4.4
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 27.1 bits (57), Expect = 0.16
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +1
Query: 163 HANTFQRAKHILELPDSKILTLQFDKNSLTMNGTISTLQNSKRTFCRNSIIKL 321
H N + + ++ DSK+ TL N +T +S + + F N+ I L
Sbjct: 579 HGNFIESLGNYYKIRDSKVKTLDASHNRITELSPLSVPDSVELLFINNNYINL 631
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 24.2 bits (50), Expect = 1.1
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +3
Query: 390 VHVDEFLDSDDSSKEVFQSLLDYGVAFITG-----VQPSAEATETCAK 518
++VDE L SD F+ L+D G G V P A AT+ C K
Sbjct: 32 INVDEILHSDRLLNNYFKCLMDEGRCTAEGNELKRVLPDALATD-CKK 78
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 24.2 bits (50), Expect = 1.1
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +3
Query: 390 VHVDEFLDSDDSSKEVFQSLLDYGVAFITG-----VQPSAEATETCAK 518
++VDE L SD F+ L+D G G V P A AT+ C K
Sbjct: 32 INVDEILHSDRLLNNYFKCLMDEGRCTAEGNELKRVLPDALATD-CKK 78
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 24.2 bits (50), Expect = 1.1
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +3
Query: 390 VHVDEFLDSDDSSKEVFQSLLDYGVAFITG-----VQPSAEATETCAK 518
++VDE L SD F+ L+D G G V P A AT+ C K
Sbjct: 32 INVDEILHSDRLLNNYFKCLMDEGRCTAEGNELKRVLPDALATD-CKK 78
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +1
Query: 547 WCYRGNSPQXLITADTGYTNLPLAAHNG*YLLGL 648
W Y GN +++++TG + YL+G+
Sbjct: 132 WTYDGNQVDLVLSSETGGDLSDFITNGEWYLIGM 165
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +1
Query: 547 WCYRGNSPQXLITADTGYTNLPLAAHNG*YLLGL 648
W Y GN +++++TG + YL+G+
Sbjct: 132 WTYDGNQVDLVLSSETGGDLSDFITNGEWYLIGM 165
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +1
Query: 547 WCYRGNSPQXLITADTGYTNLPLAAHNG*YLLGL 648
W Y GN +++++TG + YL+G+
Sbjct: 132 WTYDGNQVDLVLSSETGGDLSDFITNGEWYLIGM 165
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +1
Query: 547 WCYRGNSPQXLITADTGYTNLPLAAHNG*YLLGL 648
W Y GN +++++TG + YL+G+
Sbjct: 132 WTYDGNQVDLVLSSETGGDLSDFITNGEWYLIGM 165
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +1
Query: 547 WCYRGNSPQXLITADTGYTNLPLAAHNG*YLLGL 648
W Y GN +++++TG + YL+G+
Sbjct: 132 WTYDGNQVDLVLSSETGGDLSDFITNGEWYLIGM 165
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +1
Query: 547 WCYRGNSPQXLITADTGYTNLPLAAHNG*YLLGL 648
W Y GN +++++TG + YL+G+
Sbjct: 132 WTYDGNQVDLVLSSETGGDLSDFITNGEWYLIGM 165
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +1
Query: 547 WCYRGNSPQXLITADTGYTNLPLAAHNG*YLLGL 648
W Y GN +++++TG + YL+G+
Sbjct: 200 WTYDGNQVDLVLSSETGGDLSDFITNGEWYLIGM 233
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +1
Query: 547 WCYRGNSPQXLITADTGYTNLPLAAHNG*YLLGL 648
W Y GN +++++TG + YL+G+
Sbjct: 200 WTYDGNQVDLVLSSETGGDLSDFITNGEWYLIGM 233
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -2
Query: 272 VLIVPFIVRLFLSNCNVSIFESGSSKMCLAL 180
V + F+VR CN + S +C+AL
Sbjct: 62 VCVAVFLVRKLRRPCNYLLVSLAVSDLCVAL 92
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 22.2 bits (45), Expect = 4.4
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 172 TFQRAKHILELPDSKILTLQFDKNSLTMNGTISTLQ-NSKRTF 297
TF+ K+++ D +TLQ KN++ T S++ +RTF
Sbjct: 517 TFREQKNLMIELDKFPITLQPGKNTIEQKSTKSSVTIPFERTF 559
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,595
Number of Sequences: 438
Number of extensions: 3591
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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