Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1369
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    25   0.69 
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    24   1.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.8  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   2.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.8  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    23   2.8  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    23   2.8  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   2.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   2.8  
AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...    22   4.9  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -1

Query: 86  NLLIKETNSLL*IMYICHYY 27
           N LI+E++S++   Y CH+Y
Sbjct: 178 NRLIEESSSVMEAAYSCHWY 197


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -2

Query: 631 FFANFAVFHSNDAKIIFHDECDYF-TMFTWSYRLNHGKCTLHFLKSVFRVA-GAQSLIYN 458
           FF  +A FH+     ++  E DY+  +  W Y L+   C  +F  ++  +     S+ Y 
Sbjct: 279 FFICWAPFHTQRLLYVYAQESDYYPDLNEWLYILS--GCLYYFSTTINPILYNLMSIKYR 336

Query: 457 N 455
           N
Sbjct: 337 N 337


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = -2

Query: 631 FFANFAVFHSNDAKIIFHDECDYFTMFTWSYRLNHGKCTLHFL 503
           +F +F    +N   I  H +     +    YRLNH   T H +
Sbjct: 461 YFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTYHIV 503


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +3

Query: 333 FDNSVQIIDAKKGKNVLKRVQL--PPLNLDMLQIGN 434
           F N  QI+D K   NV K++ +     N D+  I N
Sbjct: 508 FSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIKSISN 543


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = -2

Query: 631 FFANFAVFHSNDAKIIFHDECDYFTMFTWSYRLNHGKCTLHFL 503
           +F +F    +N   I  H +     +    YRLNH   T H +
Sbjct: 461 YFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTYHIV 503


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 523 KCTLHFLKSVFRVAGAQSLIYNNFENIL 440
           K TLH   ++++  G  +     F NIL
Sbjct: 254 KSTLHCWATIYKTEGGNAFFKGAFSNIL 281


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 523 KCTLHFLKSVFRVAGAQSLIYNNFENIL 440
           K TLH   ++++  G  +     F NIL
Sbjct: 254 KSTLHCWATIYKTEGGNAFFKGAFSNIL 281


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = -2

Query: 631 FFANFAVFHSNDAKIIFHDECDYFTMFTWSYRLNHGKCTLHFL 503
           +F +F    +N   I  H +     +    YRLNH   T H +
Sbjct: 87  YFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTYHIV 129


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +3

Query: 333 FDNSVQIIDAKKGKNVLKRVQL--PPLNLDMLQIGN 434
           F N  QI+D K   NV K++ +     N D+  I N
Sbjct: 508 FSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIKSISN 543


>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
           protein.
          Length = 134

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 545 PSEHGKIITFIMKNDFRIVRMKNGKICKEFAMG 643
           P+   K++   +K +  ++ M+N K C E A G
Sbjct: 70  PTGFRKVLVHNVK-ELEVLMMQNRKFCAEIAHG 101


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,026
Number of Sequences: 438
Number of extensions: 3875
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)