Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1367
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     28   0.33 
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           25   2.3  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           25   2.3  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   9.2  

>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = +3

Query: 237 QGDYASKHXRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVP 407
           +GDY     + PKP +++  +    P   ++ ++S   T    GP  S A  NL  P
Sbjct: 321 RGDYGILTYKQPKPYKMATAFAAAYPYGQLRIMSSFAFTDFDQGP-PSDAQGNLLSP 376


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 345 TLTQTASGPETSPASDNLSVPSSDTWD 425
           T T  ASGP T+  S + + PSS   D
Sbjct: 65  TTTTVASGPVTTTGSTDTTTPSSAPQD 91


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 345 TLTQTASGPETSPASDNLSVPSSDTWD 425
           T T  ASGP T+  S + + PSS   D
Sbjct: 75  TTTTVASGPVTTTGSTDTTTPSSAPQD 101


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 293 HLSAGIPGDACAAANVINSYTDGV 364
           H+SAG+P ++     + N   DGV
Sbjct: 635 HISAGVPQESILGPTLWNVMYDGV 658


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,229
Number of Sequences: 2352
Number of extensions: 14400
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)