Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1363
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase (ubiqu... 112 9e-25
BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase (ubi... 112 9e-25
BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase (ubi... 112 9e-25
BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase (ubi... 112 9e-25
BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH dehydro... 112 9e-25
AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone oxidore... 112 9e-25
>L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase
(ubiquinone) protein.
Length = 375
Score = 112 bits (270), Expect = 9e-25
Identities = 50/100 (50%), Positives = 74/100 (74%)
Frame = +1
Query: 247 FRFTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAK 426
F TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI +
Sbjct: 57 FGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRR 116
Query: 427 AVRYSNVVINLVGRDYETKNFKYNDVHVMV*EELPESAEK 546
V++SNVVINL+GRD+ETKNF + DV V + + + + +++
Sbjct: 117 VVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 156
Score = 33.1 bits (72), Expect = 0.88
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 173 RKPNLAAYKRGTGGRSSFNGIVATVFGS 256
R+ + A G GGRSS +GIVATVFG+
Sbjct: 32 RQLHHALMPHGKGGRSSVSGIVATVFGA 59
>BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 112 bits (270), Expect = 9e-25
Identities = 50/100 (50%), Positives = 74/100 (74%)
Frame = +1
Query: 247 FRFTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAK 426
F TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI +
Sbjct: 59 FGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRR 118
Query: 427 AVRYSNVVINLVGRDYETKNFKYNDVHVMV*EELPESAEK 546
V++SNVVINL+GRD+ETKNF + DV V + + + + +++
Sbjct: 119 VVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 158
Score = 33.1 bits (72), Expect = 0.88
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 173 RKPNLAAYKRGTGGRSSFNGIVATVFGS 256
R+ + A G GGRSS +GIVATVFG+
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGA 61
>BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 112 bits (270), Expect = 9e-25
Identities = 50/100 (50%), Positives = 74/100 (74%)
Frame = +1
Query: 247 FRFTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAK 426
F TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI +
Sbjct: 59 FGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRR 118
Query: 427 AVRYSNVVINLVGRDYETKNFKYNDVHVMV*EELPESAEK 546
V++SNVVINL+GRD+ETKNF + DV V + + + + +++
Sbjct: 119 VVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 158
Score = 33.1 bits (72), Expect = 0.88
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 173 RKPNLAAYKRGTGGRSSFNGIVATVFGS 256
R+ + A G GGRSS +GIVATVFG+
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGA 61
>BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 112 bits (270), Expect = 9e-25
Identities = 50/100 (50%), Positives = 74/100 (74%)
Frame = +1
Query: 247 FRFTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAK 426
F TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI +
Sbjct: 59 FGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRR 118
Query: 427 AVRYSNVVINLVGRDYETKNFKYNDVHVMV*EELPESAEK 546
V++SNVVINL+GRD+ETKNF + DV V + + + + +++
Sbjct: 119 VVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 158
Score = 33.1 bits (72), Expect = 0.88
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 173 RKPNLAAYKRGTGGRSSFNGIVATVFGS 256
R+ + A G GGRSS +GIVATVFG+
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGA 61
>BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH
dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 (39kD)
protein.
Length = 338
Score = 112 bits (270), Expect = 9e-25
Identities = 50/100 (50%), Positives = 74/100 (74%)
Frame = +1
Query: 247 FRFTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAK 426
F TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI +
Sbjct: 20 FGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRR 79
Query: 427 AVRYSNVVINLVGRDYETKNFKYNDVHVMV*EELPESAEK 546
V++SNVVINL+GRD+ETKNF + DV V + + + + +++
Sbjct: 80 VVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 119
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 203 GTGGRSSFNGIVATVFGS 256
G GGRSS +GIVATVFG+
Sbjct: 5 GKGGRSSVSGIVATVFGA 22
>AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone
oxidoreductase 39kDa subunit protein.
Length = 377
Score = 112 bits (270), Expect = 9e-25
Identities = 50/100 (50%), Positives = 74/100 (74%)
Frame = +1
Query: 247 FRFTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAK 426
F TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI +
Sbjct: 59 FGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRR 118
Query: 427 AVRYSNVVINLVGRDYETKNFKYNDVHVMV*EELPESAEK 546
V++SNVVINL+GRD+ETKNF + DV V + + + + +++
Sbjct: 119 VVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 158
Score = 33.1 bits (72), Expect = 0.88
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 173 RKPNLAAYKRGTGGRSSFNGIVATVFGS 256
R+ + A G GGRSS +GIVATVFG+
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGA 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,455,778
Number of Sequences: 237096
Number of extensions: 1954709
Number of successful extensions: 2592
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2588
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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