Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1363
         (648 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3380|AAF51613.1|  416|Drosophila melanogaster CG6020-PA...   145   4e-35
BT004491-1|AAO42655.1|  327|Drosophila melanogaster GM13757p pro...   107   1e-23
BT029034-1|ABJ16967.1|  324|Drosophila melanogaster IP02858p pro...    66   4e-11

>AE014296-3380|AAF51613.1|  416|Drosophila melanogaster CG6020-PA
           protein.
          Length = 416

 Score =  145 bits (352), Expect = 4e-35
 Identities = 76/129 (58%), Positives = 87/129 (67%)
 Frame = +1

Query: 247 FRFTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAK 426
           F  TGFVGRYVCNKLGK GTQ+ILPYRGD  D  RLKV GDLGQVLF  Y+L D  SI  
Sbjct: 69  FGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLKVTGDLGQVLFHFYNLEDPASIRD 128

Query: 427 AVRYSNVVINLVGRDYETKNFKYNDVHVMV*EELPESAEKKELRDSFICLI*NAEEHPKP 606
           AV++SNVVINLVGRD+ETKNFK+ DVHV   E +   A +  +         N E +PK 
Sbjct: 129 AVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAGVERLIHLSSLNVEANPKD 188

Query: 607 LVLKKPSAW 633
           L +K  S W
Sbjct: 189 LYVKGGSEW 197



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = +2

Query: 182 NLAAYKRGTGGRSSFNGIVATVFGS 256
           N AA KRGTGGRSSFNGIVATVFG+
Sbjct: 47  NPAAMKRGTGGRSSFNGIVATVFGA 71


>BT004491-1|AAO42655.1|  327|Drosophila melanogaster GM13757p
           protein.
          Length = 327

 Score =  107 bits (258), Expect = 1e-23
 Identities = 58/108 (53%), Positives = 69/108 (63%)
 Frame = +1

Query: 310 LILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNF 489
           +ILPYRGD  D  RLKV GDLGQVLF  Y+L D  SI  AV++SNVVINLVGRD+ETKNF
Sbjct: 1   MILPYRGDDSDVIRLKVTGDLGQVLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNF 60

Query: 490 KYNDVHVMV*EELPESAEKKELRDSFICLI*NAEEHPKPLVLKKPSAW 633
           K+ DVHV   E +   A +  +         N E +PK L +K  S W
Sbjct: 61  KFKDVHVNGAERIARIAREAGVERFIHLSSLNVEANPKDLYVKGGSEW 108


>BT029034-1|ABJ16967.1|  324|Drosophila melanogaster IP02858p
           protein.
          Length = 324

 Score = 66.1 bits (154), Expect = 4e-11
 Identities = 35/73 (47%), Positives = 44/73 (60%)
 Frame = +1

Query: 415 SIAKAVRYSNVVINLVGRDYETKNFKYNDVHVMV*EELPESAEKKELRDSFICLI*NAEE 594
           SI  AV++SNVVINLVGRD+ETKNFK+ DVHV   E +   A +  +         N E 
Sbjct: 33  SIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAGVERLIHLSSLNVEA 92

Query: 595 HPKPLVLKKPSAW 633
           +PK L +K  S W
Sbjct: 93  NPKDLYVKGGSEW 105


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,297,336
Number of Sequences: 53049
Number of extensions: 579650
Number of successful extensions: 1249
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1240
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)