Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1361
         (618 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75554-8|CAA99959.2|  259|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AL032637-13|CAA21615.1|  709|Caenorhabditis elegans Hypothetical...    29   2.7  
L23649-3|AAA27909.2|  601|Caenorhabditis elegans Tyrosinase prot...    27   8.1  

>Z75554-8|CAA99959.2|  259|Caenorhabditis elegans Hypothetical
           protein ZC455.10 protein.
          Length = 259

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 417 VPPMLSSVLPETSQPXIFTTQSLQRRRTQPCESKINEDKLQ 539
           +PP L      T QP  +T Q +   R  P E  + E+ +Q
Sbjct: 108 IPPKLGFAKDSTGQPLYYTVQLVNLFRANPGERWVTEEGIQ 148


>AL032637-13|CAA21615.1|  709|Caenorhabditis elegans Hypothetical
           protein Y43F8C.14 protein.
          Length = 709

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +1

Query: 61  VVMEKEHQPDSMATITMKPEY--PPSEVYSTSEPPPAYRHRVSTSV 192
           +V++K   P ++AT T KP    PP      SEPPPA++    +S+
Sbjct: 275 IVVKKLQAPIALATSTPKPAMCRPPKH----SEPPPAFQDSFVSSI 316


>L23649-3|AAA27909.2|  601|Caenorhabditis elegans Tyrosinase protein
           1 protein.
          Length = 601

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 53  CLSKFIYCSSLGNAHCV 3
           C S++++C + GN HCV
Sbjct: 393 CGSQYLFCDTRGNPHCV 409


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,392,853
Number of Sequences: 27780
Number of extensions: 298943
Number of successful extensions: 892
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)