Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1352
         (479 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   0.74 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   3.9  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   3.9  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   3.9  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 0.74
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 265 GRGELYNGYSGREHXTXHPL 324
           GRG ++ G+  RE  + +PL
Sbjct: 53  GRGTIFEGHDDREQPSVYPL 72


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 140 GTTGRLLRGE 169
           GTTG +LRGE
Sbjct: 16  GTTGNILRGE 25


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 140 GTTGRLLRGE 169
           GTTG +LRGE
Sbjct: 16  GTTGNILRGE 25


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 140 GTTGRLLRGE 169
           GTTG +LRGE
Sbjct: 16  GTTGNILRGE 25


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,978
Number of Sequences: 438
Number of extensions: 1395
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)