Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1350
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.8  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   4.9  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   4.9  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    22   6.4  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    22   6.4  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 62  PWKGNYSNNSRFTLKFIP 115
           P +GN   N+++ LKF P
Sbjct: 871 PLEGNLMINNKYALKFFP 888


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 634 IGPFSGHWIWRNPGEIKQTL 693
           + PF  HWIW   G +++ +
Sbjct: 169 VQPFLIHWIWTPHGWMRRNV 188


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/30 (23%), Positives = 18/30 (60%)
 Frame = +3

Query: 66  GKETIVTIHDLP*NLYLWCKILKSAEYLGP 155
           G+  ++ ++++P +  + C+I    E+L P
Sbjct: 44  GQTPLIKLNNIPKSYGIKCEIYAKCEFLNP 73


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 187 LLNAAIMSPIAHPPCTPSAS 246
           LLNA +   +   PCTP A+
Sbjct: 42  LLNAYVNCLLDQGPCTPDAA 61


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 187 LLNAAIMSPIAHPPCTPSAS 246
           LLNA +   +   PCTP A+
Sbjct: 42  LLNAYVNCLLDQGPCTPDAA 61


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,440
Number of Sequences: 438
Number of extensions: 3527
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)