Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1349
         (638 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   5.8  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.6  

>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 531 YLTAEEPADGSDISSPXVYRLPRAANSRTSPRRK 632
           Y+  + P+DG+         LP  A+   S RRK
Sbjct: 303 YIQLKRPSDGATSEPFPFLMLPLGADDPDSLRRK 336


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 414 FPDKPWKGQQNEPN 455
           F D+P  G+ N+PN
Sbjct: 234 FLDEPLSGETNDPN 247


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 414 FPDKPWKGQQNEPN 455
           F D+P  G+ N+PN
Sbjct: 234 FLDEPLSGETNDPN 247


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,855
Number of Sequences: 438
Number of extensions: 4873
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)