Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1348
(568 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0578 + 4295386-4296489,4297394-4297507 108 3e-24
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 107 6e-24
10_02_0199 + 6668902-6669293,6669825-6669882 38 0.006
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 33 0.12
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 33 0.16
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 32 0.28
05_03_0163 + 9070781-9071320 31 0.48
03_01_0123 + 965657-966214,967827-967995,968632-969236,969333-96... 31 0.64
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 30 1.5
08_02_0329 - 15833124-15833825 29 2.0
08_02_0105 + 12448808-12449152,12449218-12449409,12449520-124496... 29 2.0
07_03_1387 + 26202975-26203274,26203363-26203449,26203541-262036... 29 2.0
07_01_0469 - 3552409-3553368 29 2.6
01_01_1233 + 10003713-10004369,10004772-10004851,10004928-100050... 29 2.6
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 29 3.4
06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-19... 29 3.4
10_07_0029 + 12031711-12032464,12044289-12044386 28 4.5
08_02_1017 - 23616244-23616381,23616471-23616537,23617160-236172... 28 4.5
02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,121... 28 4.5
02_01_0158 - 1103461-1104186 28 4.5
10_07_0130 + 13241085-13241151,13241268-13241339,13242458-132428... 28 6.0
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836... 28 6.0
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 28 6.0
05_03_0117 + 8580270-8580677,8581541-8582328,8582412-8582663,858... 28 6.0
04_04_1537 - 34235360-34235486,34236107-34236234,34236344-342364... 28 6.0
04_01_0244 - 3194141-3195091,3195301-3195312 28 6.0
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 28 6.0
03_01_0147 - 1170481-1171260,1171332-1171511 28 6.0
03_01_0092 - 731069-731434,731569-733080 28 6.0
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 28 6.0
07_03_1636 + 28290642-28291574 27 7.9
05_06_0214 - 26425100-26425922,26426008-26426058,26426183-264262... 27 7.9
02_05_0197 - 26641356-26642188,26642312-26642398,26643373-266434... 27 7.9
01_05_0564 + 23312419-23312987,23314652-23314751,23314832-233150... 27 7.9
01_05_0534 + 22999876-23000333,23000835-23000949 27 7.9
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 108 bits (259), Expect = 3e-24
Identities = 47/56 (83%), Positives = 49/56 (87%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHRRVN 422
QTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAP WHRRVN
Sbjct: 65 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWHRRVN 120
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = +1
Query: 85 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 258
RPLVSV + + + T ++ L VF+AP+RPD+V VH +S N RQPY VS+ AGH+
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65
Score = 33.9 bits (74), Expect = 0.091
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELPLXVADKVQEIN 562
PTK WR+ + +AAT VP+ E +PELPL ++D + I
Sbjct: 108 PTKTWRKWHRRVNVHLRRVAVASA-LAATSVPSLVLARGHRIETVPELPLVISDSAESIE 166
Query: 563 KT 568
KT
Sbjct: 167 KT 168
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 107 bits (257), Expect = 6e-24
Identities = 53/92 (57%), Positives = 57/92 (61%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHRRVNXXXX 434
QTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAP WHRRVN
Sbjct: 64 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVN-IRL 122
Query: 435 XXXXXXXXXXXXXXXXXXXXRGHIMKRFPSFP 530
RGH ++ P FP
Sbjct: 123 RRIAVASALAATAVPSLVLARGHRIEGVPEFP 154
Score = 58.0 bits (134), Expect = 5e-09
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +1
Query: 76 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
+ ARPLVSV + E A +P V +APIRPD+V H +S N RQPY VS+ AG
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62
Query: 253 HK 258
H+
Sbjct: 63 HQ 64
Score = 32.3 bits (70), Expect = 0.28
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELPLXVADKVQEIN 562
PTK WR+ + +AAT VP+ E +PE PL V+D ++ I
Sbjct: 107 PTKIWRRWHRRVNIRLRRIAVASA-LAATAVPSLVLARGHRIEGVPEFPLVVSDSIESIE 165
Query: 563 KT 568
KT
Sbjct: 166 KT 167
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 37.9 bits (84), Expect = 0.006
Identities = 25/60 (41%), Positives = 27/60 (45%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHR 413
RE GG A+SW TGRA A + R R GG R A N G R GG W R
Sbjct: 30 REGGG----GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGN-----REGGGGWRR 80
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 33.5 bits (73), Expect = 0.12
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1
Query: 370 PPRHMLPKAP*PDLWVPPP 314
PPRH++P+ P P WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 33.1 bits (72), Expect = 0.16
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +3
Query: 48 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 203
ASL N + P+F V G SQA V + GAHT G Q C F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 32.3 bits (70), Expect = 0.28
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 48 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 203
ASL N I +PTF +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>05_03_0163 + 9070781-9071320
Length = 179
Score = 31.5 bits (68), Expect = 0.48
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQG 344
R GGWSQ AE WG G ++ GGG RS +G
Sbjct: 15 RGAGGWSQR-AEGWGGGGGRSQRAEGGGGGGGRSRRG 50
>03_01_0123 +
965657-966214,967827-967995,968632-969236,969333-969434
Length = 477
Score = 31.1 bits (67), Expect = 0.64
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 219 EAALLREQGGWSQTSAESWGTGRAV 293
EAALLR G W++ + + WG G V
Sbjct: 367 EAALLRAAGDWARGAGQRWGVGDVV 391
>11_01_0072 +
570345-570476,570640-570831,571095-571260,571487-571872
Length = 291
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 48 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 203
ASL N I +PT +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>08_02_0329 - 15833124-15833825
Length = 233
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 386 TKPWRQLAPSRQPPTAESGLGKQPVAATGVP 478
T PW Q + + PP A +G G Q AA +P
Sbjct: 163 TAPWLQPSSATAPPLAPAGSGGQAAAAPPLP 193
>08_02_0105 +
12448808-12449152,12449218-12449409,12449520-12449685,
12449771-12450201
Length = 377
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 48 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 203
ASL+ N ++ +PT V ++ G S V + GAHT G + C+ F
Sbjct: 197 ASLQGANTNLPAPTSGVATLVQKFRNVGLSAKDMVALSGAHTIGKAR-CTTF 247
>07_03_1387 +
26202975-26203274,26203363-26203449,26203541-26203648,
26203708-26203980,26205242-26205355,26205900-26206268
Length = 416
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +1
Query: 391 ALAAAGTVASTSDSGERPWQAA 456
A AAA AST+ G RPW AA
Sbjct: 4 AAAAAAAAASTARGGHRPWTAA 25
>07_01_0469 - 3552409-3553368
Length = 319
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 386 TKPWR-QLAPSRQPPTAESGLGKQPVAATGVPAA 484
T P R QLAP PP+A P AA VPAA
Sbjct: 196 TAPVRIQLAPRNPPPSAAPAAPPVPPAAPAVPAA 229
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 375 YVHHDTCYRRHPDRTYG 325
Y+ HDT YR HP R G
Sbjct: 94 YIFHDTAYRFHPRRASG 110
>01_01_1233 +
10003713-10004369,10004772-10004851,10004928-10005011,
10005012-10005190,10005347-10005391,10006148-10006335
Length = 410
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +3
Query: 249 WSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGS 404
W A + TG A A + GGG HR A +C PR+ GGS
Sbjct: 134 WRTYLASAADTGGAAASCS-LAGGGRHRRWLAALSCVCPVVSWMRPRADGGS 184
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 210 QELEAALLREQGGWSQTSAESWGTGRAVAR--IPRVRGGGTHRSGQGAFGNMCR---GGR 374
+++ A ++GG S S S G++V + + R+R H G G+ G++ + GG+
Sbjct: 64 EKVSGAKSTDEGGGSDKSKGS-EVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGK 122
Query: 375 MFAPRSP 395
M P P
Sbjct: 123 MLRPGFP 129
>06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-196342,
196685-196780,197248-197399,198683-198823,199068-199319,
199463-199603,199686-200003,200146-200232,201025-202006,
202091-202179,202968-203072,203155-204306,204844-205359,
205455-205650,206299-207182
Length = 1979
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAATGVPAARS 490
P P AP Q A SGL PV +G+P +RS
Sbjct: 1896 PHPPESIAAPRGQQKGAPSGLNTVPVVGSGLPPSRS 1931
>10_07_0029 + 12031711-12032464,12044289-12044386
Length = 283
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 375 YVHHDTCYRRHPDRTYG 325
Y+ HDT YR HP R G
Sbjct: 94 YIFHDTAYRYHPRRANG 110
>08_02_1017 -
23616244-23616381,23616471-23616537,23617160-23617238,
23617330-23617486,23617581-23617719,23617820-23617872,
23618037-23618120,23618291-23618359,23618488-23618553,
23618657-23618800,23619331-23619414,23619498-23619596,
23620097-23620219,23620745-23621290
Length = 615
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 172 RPDLVNDVHVSMSKNSRQP--YCVSKEAGHKPVPNHGVPD 285
RP + DV S S +S P SK++GH V HG D
Sbjct: 38 RPSSITDVSRSCSSSSSSPPRSLSSKQSGHADVLAHGAVD 77
>02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,
1216413-1216738,1216860-1217013,1217377-1217438,
1218078-1218133,1219456-1221279,1221775-1222698,
1222855-1222866
Length = 1242
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 374
R+ GG S S G+GR R RG R G G GGR
Sbjct: 1176 RQGGGRSGYSGRGGGSGRGGGGYQRDRGSQGSRGGYGGGSRFQDGGR 1222
>02_01_0158 - 1103461-1104186
Length = 241
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 309 VRGG-GTHRSGQGAFGNMCRGGRMFAPRSPGGSW 407
V+GG G G G FG+ GG RS GGSW
Sbjct: 78 VKGGAGGGGGGGGGFGSRGGGGSGGGGRSYGGSW 111
>10_07_0130 + 13241085-13241151,13241268-13241339,13242458-13242862,
13243057-13243112,13244116-13244274,13244379-13244498,
13244591-13245361,13245902-13246078,13246192-13246669,
13247502-13248094
Length = 965
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +3
Query: 219 EAALLREQGG-WSQTSAE-SWGTGRAVARIPRVRGGGTHRSG 338
EAAL E GG W+ + E G RA A PR G SG
Sbjct: 916 EAALSPESGGRWAGPAVELGGGDARAAAAEPRGHGNNLRHSG 957
>08_02_1329 -
26182762-26183007,26183149-26183249,26183533-26183602,
26183692-26183895,26186435-26186941,26188672-26188677
Length = 377
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = +3
Query: 126 AGCSQAPPVRIQGAHTSGPGQ*CSRFYVQELEAALLREQGGWSQTSAESWGTGRAVARIP 305
AG + PP R G TSG G S + V+ + +S + + S+G G
Sbjct: 103 AGGGETPPARRGGGRTSGGGG--SSYSVEHSPSP--SPLHPYSDSGSGSYGGGLVANSRA 158
Query: 306 RVRGGGTHRSGQGAFGNMCR 365
+ GGG R + N+ R
Sbjct: 159 KGGGGGAPRGNETVIPNIIR 178
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -2
Query: 351 RRHPDRTYGYHHHGHAEFGQQHVRYPMI 268
R H D +G+HHH H G H P +
Sbjct: 68 RAHGDHHHGHHHHHHGH-GHSHHHGPEV 94
>05_03_0117 +
8580270-8580677,8581541-8582328,8582412-8582663,
8582744-8582854,8582942-8583020,8583104-8583175,
8583253-8583420
Length = 625
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAA-TGVPAA 484
PT+P +LAPSR PP + G P+AA VP A
Sbjct: 22 PTEP--KLAPSRAPPPTPTTGGWNPLAALVEVPGA 54
>04_04_1537 -
34235360-34235486,34236107-34236234,34236344-34236483,
34236967-34237023,34237358-34237475,34237585-34237734,
34237857-34237941,34238040-34238104,34238351-34238500,
34238835-34238910,34239071-34239150
Length = 391
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 371 TYVRPTKPWRQLAPSRQPPTAESGLGK 451
T V +P + APSR+PP + G GK
Sbjct: 331 TTVASREPPKTTAPSREPPKTKGGQGK 357
>04_01_0244 - 3194141-3195091,3195301-3195312
Length = 320
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 375 YVHHDTCYRRHPDRTYG 325
Y+ HDT YR HP R G
Sbjct: 98 YIFHDTAYRFHPRRANG 114
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Frame = -1
Query: 400 PPGL---RGANIRPPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSALVCDQPP 242
PPG G PP P AP P P P G + P P +A +PP
Sbjct: 309 PPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPP 364
>03_01_0147 - 1170481-1171260,1171332-1171511
Length = 319
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 42 GIASLK*R-NESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 203
G ASL+ ++I +PTF++ + G +Q V + GAHT G C+ F
Sbjct: 139 GTASLEPEVADNIPAPTFTLDQLTQSFAAKGLTQEEMVTLSGAHTVGRAH-CTSF 192
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -1
Query: 367 PRHMLPKAP*PDLWVPPPRTRGIRATARPVP 275
P H++P P P L P P+++ R P
Sbjct: 267 PHHIMPMTPQPQLQPPQPQSKEANTVVRAAP 297
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -1
Query: 322 PPPRTRGIRATARPVPHDSA-LVCDQPP 242
PPPRTR + PVP SA + QPP
Sbjct: 166 PPPRTRQVNPAPPPVPSPSAPPLPPQPP 193
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 400 PPGLRGANIRPPRHMLPKAP*PDLWVPPPRTRGIRATARPVP 275
PP R N PP P AP PPPR + +A P+P
Sbjct: 167 PPRTRQVNPAPPPVPSPSAPPLPPQPPPPRNQA-QADKAPIP 207
>07_03_1636 + 28290642-28291574
Length = 310
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -1
Query: 370 PPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSALVCDQPP 242
PP + AP +VPPP +R + P P + L PP
Sbjct: 154 PPPQLFETAPPSPPYVPPPPDAYLRKPSPPSPPPAKLSPPPPP 196
>05_06_0214 -
26425100-26425922,26426008-26426058,26426183-26426256,
26426344-26426441,26426547-26426671,26426724-26426957,
26426992-26427037,26427101-26427152,26427331-26427367,
26427521-26427637,26428287-26428352,26428439-26428518,
26429102-26429311,26429650-26429739,26430093-26430182,
26430280-26430411,26430876-26431094,26431203-26431286,
26431543-26431656,26431857-26431914,26432535-26432602,
26432847-26432962,26433495-26433574,26433839-26433912
Length = 1045
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 157 IRTGGAWLHPAPSHSSLN-TPTLKVGLPIDSF 65
+R+ WL P P+H ++N L + +P+D F
Sbjct: 865 LRSYITWLKPTPAHVAMNPAEALAMQIPVDHF 896
>02_05_0197 - 26641356-26642188,26642312-26642398,26643373-26643452,
26643948-26644120,26644227-26644308,26644623-26644758,
26644777-26644833,26644905-26645120,26645939-26646335,
26646458-26646544,26647063-26647324,26648892-26648972,
26649176-26650350
Length = 1221
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGT--HRSGQGAF 350
R + GW A+ + + R P +GGG R GQG F
Sbjct: 1121 RREQGWDAHQAQVGAQHQNLPRFPPQQGGGNIGERQGQGQF 1161
>01_05_0564 +
23312419-23312987,23314652-23314751,23314832-23315055,
23315212-23316041,23316161-23316275,23316786-23316905,
23317410-23317450,23317546-23317595,23317684-23317719,
23317836-23317856
Length = 701
Score = 27.5 bits (58), Expect = 7.9
Identities = 23/61 (37%), Positives = 27/61 (44%)
Frame = +3
Query: 165 AHTSGPGQ*CSRFYVQELEAALLREQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQG 344
A T+G G YV + + ALL E + E GRA RI RG G GQG
Sbjct: 35 AETAGSGD--DEEYVSDPDDALLPEMRRREASDDEGSEEGRA--RIGSDRGDGDDGDGQG 90
Query: 345 A 347
A
Sbjct: 91 A 91
>01_05_0534 + 22999876-23000333,23000835-23000949
Length = 190
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +2
Query: 371 TYVRPTKPWRQLAPSRQPPTAESGLGKQPVA--ATGVPAARSG*RTHYEK 514
T +P P + APS PP ++ KQ A A PAA Y++
Sbjct: 68 TLSQPPTPVKPAAPSSSPPPSQDPEPKQAAAPVAVAAPAAAGAVTLEYQR 117
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,005,487
Number of Sequences: 37544
Number of extensions: 429408
Number of successful extensions: 1773
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1766
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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