Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1348
(568 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 113 5e-25
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 113 5e-25
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 113 5e-25
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 113 5e-25
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 113 5e-25
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 113 5e-25
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 113 5e-25
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 113 5e-25
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 113 5e-25
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 113 5e-25
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 113 5e-25
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 113 5e-25
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 113 5e-25
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 111 2e-24
AL160276-5|CAI40649.1| 318|Homo sapiens Rap guanine nucleotide ... 33 0.93
DQ925683-1|ABL59910.1| 104|Homo sapiens guanine nucleotide-rele... 32 1.6
DQ925677-1|ABL59904.1| 243|Homo sapiens guanine nucleotide-rele... 32 1.6
X80700-1|CAA56717.1| 430|Homo sapiens PBX2 protein. 31 3.7
U89336-2|AAB47490.1| 430|Homo sapiens homeobox PBX2 gene protein. 31 3.7
D28769-1|BAA05957.1| 430|Homo sapiens HOX12 protein protein. 31 3.7
BX284686-20|CAM26228.1| 430|Homo sapiens pre-B-cell leukemia tr... 31 3.7
BC082261-1|AAH82261.1| 430|Homo sapiens pre-B-cell leukemia hom... 31 3.7
AL845464-20|CAI41814.1| 430|Homo sapiens pre-B-cell leukemia tr... 31 3.7
AL662884-25|CAI18358.1| 430|Homo sapiens pre-B-cell leukemia tr... 31 3.7
AL662830-7|CAI17539.1| 430|Homo sapiens pre-B-cell leukemia tra... 31 3.7
AB011174-1|BAA25528.1| 962|Homo sapiens KIAA0602 protein protein. 31 3.7
U51127-1|AAA96056.1| 504|Homo sapiens interferon regulatory fac... 30 4.9
EF064718-1|ABK41901.1| 514|Homo sapiens interferon regulatory f... 30 4.9
DQ277633-1|ABB88960.1| 488|Homo sapiens interferon regulatory f... 30 4.9
BC004201-1|AAH04201.1| 498|Homo sapiens interferon regulatory f... 30 4.9
BC004139-1|AAH04139.1| 498|Homo sapiens interferon regulatory f... 30 4.9
AY693667-1|AAU12879.1| 389|Homo sapiens interferon regulatory f... 30 4.9
AY693666-1|AAU12878.1| 498|Homo sapiens interferon regulatory f... 30 4.9
AY693665-1|AAU12877.1| 514|Homo sapiens interferon regulatory f... 30 4.9
AY504947-1|AAR90326.1| 488|Homo sapiens interferon regulatory f... 30 4.9
AY504946-1|AAR90325.1| 488|Homo sapiens interferon regulatory f... 30 4.9
BC131489-1|AAI31490.1| 604|Homo sapiens USP35 protein protein. 29 8.6
AK098728-1|BAC05393.1| 196|Homo sapiens protein ( Homo sapiens ... 29 8.6
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 113 bits (271), Expect = 5e-25
Identities = 50/56 (89%), Positives = 50/56 (89%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHRRVN 422
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP WHRRVN
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 35.9 bits (79), Expect = 0.099
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELPLXVADKVQEIN 562
PTK WR+ R T + +AA+ +PA E++PELPL V DKV+
Sbjct: 104 PTKTWRRWH-RRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYK 162
Query: 563 KT 568
KT
Sbjct: 163 KT 164
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 5e-25
Identities = 50/56 (89%), Positives = 50/56 (89%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHRRVN 422
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP WHRRVN
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 35.9 bits (79), Expect = 0.099
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELPLXVADKVQEIN 562
PTK WR+ R T + +AA+ +PA E++PELPL V DKV+
Sbjct: 104 PTKTWRRWH-RRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYK 162
Query: 563 KT 568
KT
Sbjct: 163 KT 164
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 5e-25
Identities = 50/56 (89%), Positives = 50/56 (89%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHRRVN 422
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP WHRRVN
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 35.9 bits (79), Expect = 0.099
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELPLXVADKVQEIN 562
PTK WR+ R T + +AA+ +PA E++PELPL V DKV+
Sbjct: 104 PTKTWRRWH-RRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYK 162
Query: 563 KT 568
KT
Sbjct: 163 KT 164
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 5e-25
Identities = 50/56 (89%), Positives = 50/56 (89%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHRRVN 422
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP WHRRVN
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 35.9 bits (79), Expect = 0.099
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELPLXVADKVQEIN 562
PTK WR+ R T + +AA+ +PA E++PELPL V DKV+
Sbjct: 104 PTKTWRRWH-RRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYK 162
Query: 563 KT 568
KT
Sbjct: 163 KT 164
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 5e-25
Identities = 50/56 (89%), Positives = 50/56 (89%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHRRVN 422
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP WHRRVN
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 35.9 bits (79), Expect = 0.099
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELPLXVADKVQEIN 562
PTK WR+ R T + +AA+ +PA E++PELPL V DKV+
Sbjct: 104 PTKTWRRWH-RRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYK 162
Query: 563 KT 568
KT
Sbjct: 163 KT 164
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 5e-25
Identities = 50/56 (89%), Positives = 50/56 (89%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHRRVN 422
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP WHRRVN
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 35.9 bits (79), Expect = 0.099
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELPLXVADKVQEIN 562
PTK WR+ R T + +AA+ +PA E++PELPL V DKV+
Sbjct: 104 PTKTWRRWH-RRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYK 162
Query: 563 KT 568
KT
Sbjct: 163 KT 164
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 5e-25
Identities = 50/56 (89%), Positives = 50/56 (89%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHRRVN 422
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP WHRRVN
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 35.9 bits (79), Expect = 0.099
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELPLXVADKVQEIN 562
PTK WR+ R T + +AA+ +PA E++PELPL V DKV+
Sbjct: 104 PTKTWRRWH-RRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYK 162
Query: 563 KT 568
KT
Sbjct: 163 KT 164
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 5e-25
Identities = 50/56 (89%), Positives = 50/56 (89%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHRRVN 422
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP WHRRVN
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 35.9 bits (79), Expect = 0.099
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELPLXVADKVQEIN 562
PTK WR+ R T + +AA+ +PA E++PELPL V DKV+
Sbjct: 104 PTKTWRRWH-RRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYK 162
Query: 563 KT 568
KT
Sbjct: 163 KT 164
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 5e-25
Identities = 50/56 (89%), Positives = 50/56 (89%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHRRVN 422
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP WHRRVN
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 35.9 bits (79), Expect = 0.099
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELPLXVADKVQEIN 562
PTK WR+ R T + +AA+ +PA E++PELPL V DKV+
Sbjct: 104 PTKTWRRWH-RRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYK 162
Query: 563 KT 568
KT
Sbjct: 163 KT 164
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 5e-25
Identities = 50/56 (89%), Positives = 50/56 (89%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHRRVN 422
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP WHRRVN
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 35.9 bits (79), Expect = 0.099
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELPLXVADKVQEIN 562
PTK WR+ R T + +AA+ +PA E++PELPL V DKV+
Sbjct: 104 PTKTWRRWH-RRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYK 162
Query: 563 KT 568
KT
Sbjct: 163 KT 164
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 113 bits (271), Expect = 5e-25
Identities = 50/56 (89%), Positives = 50/56 (89%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHRRVN 422
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP WHRRVN
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 35.1 bits (77), Expect = 0.17
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELPLXVADKVQEIN 562
PTK WR+ R T + +AA+ +PA E++PELPL V DKV+
Sbjct: 104 PTKTWRRWH-RRVNTTQKRYAICSALAASALPALVMPKGHRIEEVPELPLVVEDKVEGYK 162
Query: 563 KT 568
KT
Sbjct: 163 KT 164
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 113 bits (271), Expect = 5e-25
Identities = 50/56 (89%), Positives = 50/56 (89%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHRRVN 422
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP WHRRVN
Sbjct: 75 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 130
Score = 81.0 bits (191), Expect = 3e-15
Identities = 38/63 (60%), Positives = 49/63 (77%)
Frame = +1
Query: 70 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 249
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 250 GHK 258
GH+
Sbjct: 73 GHQ 75
Score = 35.9 bits (79), Expect = 0.099
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELPLXVADKVQEIN 562
PTK WR+ R T + +AA+ +PA E++PELPL V DKV+
Sbjct: 118 PTKTWRRWH-RRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYK 176
Query: 563 KT 568
KT
Sbjct: 177 KT 178
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 5e-25
Identities = 50/56 (89%), Positives = 50/56 (89%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHRRVN 422
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP WHRRVN
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 35.9 bits (79), Expect = 0.099
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELPLXVADKVQEIN 562
PTK WR+ R T + +AA+ +PA E++PELPL V DKV+
Sbjct: 104 PTKTWRRWH-RRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYK 162
Query: 563 KT 568
KT
Sbjct: 163 KT 164
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 111 bits (267), Expect = 2e-24
Identities = 54/92 (58%), Positives = 57/92 (61%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHRRVNXXXX 434
QT AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP WHRRVN
Sbjct: 61 QTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN-TTQ 119
Query: 435 XXXXXXXXXXXXXXXXXXXXRGHIMKRFPSFP 530
+GH ++ FP P
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEFPELP 151
Score = 82.6 bits (195), Expect = 9e-16
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELPLXVADKVQEIN 562
PTK WR+ R T + +AA+ +PA E+ PELPL V DKV+
Sbjct: 104 PTKTWRRWH-RRVNTTQKRYAICSALAASALPALVMSKGHRIEEFPELPLVVEDKVEGYK 162
Query: 563 KT 568
KT
Sbjct: 163 KT 164
>AL160276-5|CAI40649.1| 318|Homo sapiens Rap guanine nucleotide
exchange factor (GEF) 1 protein.
Length = 318
Score = 32.7 bits (71), Expect = 0.93
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +2
Query: 401 QLAPSR-QPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELP--LXVADKVQEINK 565
+LAPSR +PP + G + P A +GVP S R E+ P+ P L A +E+++
Sbjct: 39 ELAPSRGEPPAGKDGHPRDPSAVSGVPGKDS--RDGSERAPKSPDALESAQSEEEVDE 94
>DQ925683-1|ABL59910.1| 104|Homo sapiens guanine
nucleotide-releasing factor 2 protein.
Length = 104
Score = 31.9 bits (69), Expect = 1.6
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 401 QLAPSR-QPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELP 529
+LAPSR +PP + G + P A +GVP S R E+ P+ P
Sbjct: 57 ELAPSRGEPPAGKDGHPRDPSAVSGVPGKDS--RDGSERAPKSP 98
>DQ925677-1|ABL59904.1| 243|Homo sapiens guanine
nucleotide-releasing factor 2 protein.
Length = 243
Score = 31.9 bits (69), Expect = 1.6
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 401 QLAPSR-QPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELP 529
+LAPSR +PP + G + P A +GVP S R E+ P+ P
Sbjct: 196 ELAPSRGEPPAGKDGHPRDPSAVSGVPGKDS--RDGSERAPKSP 237
>X80700-1|CAA56717.1| 430|Homo sapiens PBX2 protein.
Length = 430
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +3
Query: 327 HRSGQGAFGNMCRGGRMFAPRS--PGGSWHRRV 419
H G G +G+ GG+M++PR GSW V
Sbjct: 377 HSMGPGGYGDNLGGGQMYSPREMRANGSWQEAV 409
>U89336-2|AAB47490.1| 430|Homo sapiens homeobox PBX2 gene protein.
Length = 430
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +3
Query: 327 HRSGQGAFGNMCRGGRMFAPRS--PGGSWHRRV 419
H G G +G+ GG+M++PR GSW V
Sbjct: 377 HSMGPGGYGDNLGGGQMYSPREMRANGSWQEAV 409
>D28769-1|BAA05957.1| 430|Homo sapiens HOX12 protein protein.
Length = 430
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +3
Query: 327 HRSGQGAFGNMCRGGRMFAPRS--PGGSWHRRV 419
H G G +G+ GG+M++PR GSW V
Sbjct: 377 HSMGPGGYGDNLGGGQMYSPREMRANGSWQEAV 409
>BX284686-20|CAM26228.1| 430|Homo sapiens pre-B-cell leukemia
transcription factor 2 protein.
Length = 430
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +3
Query: 327 HRSGQGAFGNMCRGGRMFAPRS--PGGSWHRRV 419
H G G +G+ GG+M++PR GSW V
Sbjct: 377 HSMGPGGYGDNLGGGQMYSPREMRANGSWQEAV 409
>BC082261-1|AAH82261.1| 430|Homo sapiens pre-B-cell leukemia
homeobox 2 protein.
Length = 430
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +3
Query: 327 HRSGQGAFGNMCRGGRMFAPRS--PGGSWHRRV 419
H G G +G+ GG+M++PR GSW V
Sbjct: 377 HSMGPGGYGDNLGGGQMYSPREMRANGSWQEAV 409
>AL845464-20|CAI41814.1| 430|Homo sapiens pre-B-cell leukemia
transcription factor 2 protein.
Length = 430
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +3
Query: 327 HRSGQGAFGNMCRGGRMFAPRS--PGGSWHRRV 419
H G G +G+ GG+M++PR GSW V
Sbjct: 377 HSMGPGGYGDNLGGGQMYSPREMRANGSWQEAV 409
>AL662884-25|CAI18358.1| 430|Homo sapiens pre-B-cell leukemia
transcription factor 2 protein.
Length = 430
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +3
Query: 327 HRSGQGAFGNMCRGGRMFAPRS--PGGSWHRRV 419
H G G +G+ GG+M++PR GSW V
Sbjct: 377 HSMGPGGYGDNLGGGQMYSPREMRANGSWQEAV 409
>AL662830-7|CAI17539.1| 430|Homo sapiens pre-B-cell leukemia
transcription factor 2 protein.
Length = 430
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +3
Query: 327 HRSGQGAFGNMCRGGRMFAPRS--PGGSWHRRV 419
H G G +G+ GG+M++PR GSW V
Sbjct: 377 HSMGPGGYGDNLGGGQMYSPREMRANGSWQEAV 409
>AB011174-1|BAA25528.1| 962|Homo sapiens KIAA0602 protein protein.
Length = 962
Score = 30.7 bits (66), Expect = 3.7
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 294 ARIPRVRG--GGTHRSGQGAFGNMCRGGRMFAPRSPG 398
AR PRVRG R G G G M GR+ P +PG
Sbjct: 36 ARPPRVRGPAAAPGRRGSGGAGAMAERGRLGLPGAPG 72
>U51127-1|AAA96056.1| 504|Homo sapiens interferon regulatory factor
5 protein.
Length = 504
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -1
Query: 400 PPGLRGANIRPPRHMLPKAP*PDLWVPPP-RTRGIRATARPVPHDSALVCDQPP 242
PP L+ ++PP + P AP P PPP G R V L PP
Sbjct: 182 PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPP 235
>EF064718-1|ABK41901.1| 514|Homo sapiens interferon regulatory
factor 5 protein.
Length = 514
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -1
Query: 400 PPGLRGANIRPPRHMLPKAP*PDLWVPPP-RTRGIRATARPVPHDSALVCDQPP 242
PP L+ ++PP + P AP P PPP G R V L PP
Sbjct: 192 PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPP 245
>DQ277633-1|ABB88960.1| 488|Homo sapiens interferon regulatory
factor 5 variant 10 protein.
Length = 488
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -1
Query: 400 PPGLRGANIRPPRHMLPKAP*PDLWVPPP-RTRGIRATARPVPHDSALVCDQPP 242
PP L+ ++PP + P AP P PPP G R V L PP
Sbjct: 166 PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPP 219
>BC004201-1|AAH04201.1| 498|Homo sapiens interferon regulatory
factor 5 protein.
Length = 498
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -1
Query: 400 PPGLRGANIRPPRHMLPKAP*PDLWVPPP-RTRGIRATARPVPHDSALVCDQPP 242
PP L+ ++PP + P AP P PPP G R V L PP
Sbjct: 176 PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPP 229
>BC004139-1|AAH04139.1| 498|Homo sapiens interferon regulatory
factor 5 protein.
Length = 498
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -1
Query: 400 PPGLRGANIRPPRHMLPKAP*PDLWVPPP-RTRGIRATARPVPHDSALVCDQPP 242
PP L+ ++PP + P AP P PPP G R V L PP
Sbjct: 176 PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPP 229
>AY693667-1|AAU12879.1| 389|Homo sapiens interferon regulatory
factor 5 variant 7 protein.
Length = 389
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -1
Query: 400 PPGLRGANIRPPRHMLPKAP*PDLWVPPP-RTRGIRATARPVPHDSALVCDQPP 242
PP L+ ++PP + P AP P PPP G R V L PP
Sbjct: 67 PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPP 120
>AY693666-1|AAU12878.1| 498|Homo sapiens interferon regulatory
factor 5 variant 6 protein.
Length = 498
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -1
Query: 400 PPGLRGANIRPPRHMLPKAP*PDLWVPPP-RTRGIRATARPVPHDSALVCDQPP 242
PP L+ ++PP + P AP P PPP G R V L PP
Sbjct: 176 PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPP 229
>AY693665-1|AAU12877.1| 514|Homo sapiens interferon regulatory
factor 5 variant 5 protein.
Length = 514
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -1
Query: 400 PPGLRGANIRPPRHMLPKAP*PDLWVPPP-RTRGIRATARPVPHDSALVCDQPP 242
PP L+ ++PP + P AP P PPP G R V L PP
Sbjct: 192 PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPP 245
>AY504947-1|AAR90326.1| 488|Homo sapiens interferon regulatory
factor 5 variant 4 protein.
Length = 488
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -1
Query: 400 PPGLRGANIRPPRHMLPKAP*PDLWVPPP-RTRGIRATARPVPHDSALVCDQPP 242
PP L+ ++PP + P AP P PPP G R V L PP
Sbjct: 166 PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPP 219
>AY504946-1|AAR90325.1| 488|Homo sapiens interferon regulatory
factor 5 variant 3 protein.
Length = 488
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -1
Query: 400 PPGLRGANIRPPRHMLPKAP*PDLWVPPP-RTRGIRATARPVPHDSALVCDQPP 242
PP L+ ++PP + P AP P PPP G R V L PP
Sbjct: 166 PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPP 219
>BC131489-1|AAI31490.1| 604|Homo sapiens USP35 protein protein.
Length = 604
Score = 29.5 bits (63), Expect = 8.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 193 VHVSMSKNSRQPYCVSKEAGHKPVPNHGVPDVLLPE 300
VH +S S YC ++E +P P+ G D PE
Sbjct: 438 VHSGVSSESGHYYCYAREGAARPAPSLGTADRPEPE 473
>AK098728-1|BAC05393.1| 196|Homo sapiens protein ( Homo sapiens
cDNA FLJ25862 fis, clone CBR01781. ).
Length = 196
Score = 29.5 bits (63), Expect = 8.6
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +3
Query: 192 CSRFYVQELEAALLREQGGWSQTSAESWGTGRAVARIPRVRGGGT-HRSGQGAFGNMCRG 368
C + + E AL E+ +++S + + + GG + HR+ + GN R
Sbjct: 34 CEQVLILEPGKALRSERTPRTKSSDGACKLSQCEVTLTETLGGSSSHRTALCSDGNRVRA 93
Query: 369 GRMFAPRSPGG 401
R F P SP G
Sbjct: 94 ARAFPPNSPPG 104
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,313,770
Number of Sequences: 237096
Number of extensions: 2087571
Number of successful extensions: 6714
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 5665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6575
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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