BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1345
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D32053-1|BAA22084.1| 597|Homo sapiens Lysyl tRNA Synthetase pro... 168 1e-41
D31890-1|BAA06688.1| 601|Homo sapiens KIAA0070 protein. 168 1e-41
BC004132-1|AAH04132.1| 597|Homo sapiens lysyl-tRNA synthetase p... 168 1e-41
AF285758-1|AAG30114.1| 625|Homo sapiens lysyl-tRNA synthetase p... 168 1e-41
AK126584-1|BAC86604.1| 423|Homo sapiens protein ( Homo sapiens ... 165 1e-40
BC045173-1|AAH45173.1| 645|Homo sapiens DARS2 protein protein. 57 5e-08
AL109921-4|CAI20380.1| 645|Homo sapiens aspartyl-tRNA synthetas... 57 5e-08
AK022754-1|BAB14228.1| 463|Homo sapiens protein ( Homo sapiens ... 57 5e-08
AK001376-1|BAA91658.1| 463|Homo sapiens protein ( Homo sapiens ... 57 5e-08
J05032-1|AAA35567.1| 500|Homo sapiens protein ( Human aspartyl-... 40 0.009
BT006710-1|AAP35356.1| 501|Homo sapiens aspartyl-tRNA synthetas... 40 0.009
BC107749-1|AAI07750.1| 501|Homo sapiens aspartyl-tRNA synthetas... 40 0.009
BC000629-1|AAH00629.1| 501|Homo sapiens aspartyl-tRNA synthetas... 40 0.009
AY762100-1|AAX07827.1| 501|Homo sapiens cell proliferation-indu... 40 0.009
AK222476-1|BAD96196.1| 501|Homo sapiens aspartyl-tRNA synthetas... 40 0.009
AC011999-2|AAY15029.1| 313|Homo sapiens unknown protein. 40 0.009
Z97192-3|CAI20086.1| 183|Homo sapiens chromosome 22 open readin... 32 2.3
Z97192-2|CAO03381.1| 195|Homo sapiens chromosome 22 open readin... 32 2.3
AK124962-1|BAC86007.1| 151|Homo sapiens protein ( Homo sapiens ... 32 2.3
AB032953-1|BAA86441.2| 2144|Homo sapiens KIAA1127 protein protein. 30 6.9
CT841517-1|CAJ86447.1| 2151|Homo sapiens dJ694E4.2 protein. 30 9.1
AL031255-4|CAI22448.1| 2151|Homo sapiens chromosome 22 open read... 30 9.1
AK026712-1|BAB15536.1| 546|Homo sapiens protein ( Homo sapiens ... 30 9.1
>D32053-1|BAA22084.1| 597|Homo sapiens Lysyl tRNA Synthetase
protein.
Length = 597
Score = 168 bits (409), Expect = 1e-41
Identities = 72/84 (85%), Positives = 81/84 (96%)
Frame = +3
Query: 9 FLDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVY 188
FLD +GFLE+ETP+MN++PGGA AKPFIT+HNEL+M+LYMRIAPELYHKMLVVGG+DRVY
Sbjct: 257 FLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVY 316
Query: 189 EIGRQFRNEGIDLTHNPEFTTCNF 260
EIGRQFRNEGIDLTHNPEFTTC F
Sbjct: 317 EIGRQFRNEGIDLTHNPEFTTCEF 340
Score = 120 bits (288), Expect = 7e-27
Identities = 62/132 (46%), Positives = 80/132 (60%), Gaps = 3/132 (2%)
Frame = +2
Query: 257 FYMAYADYNDLMTITESILSGMVQSIHGSYKVKYHPEGPEGKEIEIDFTPPFARVPMMAT 436
FYMAYADY+DLM ITE ++SGMV+ I GSYKV YHP+GPEG+ ++DFTPPF R+ M+
Sbjct: 340 FYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDVDFTPPFRRINMVEE 399
Query: 437 LERVLNVKLPAPDKLDTPEANDFLTTYATLIRMSARHRGPPR--GSWINWFL-YFWREEC 607
LE+ L +KLP + +T E L A PPR ++ + F C
Sbjct: 400 LEKALGMKLPETNLFETEETRKILDDICV---AKAVECPPPRTTARLLDKLVGEFLEVTC 456
Query: 608 INPHLLXDHPQI 643
INP + DHPQI
Sbjct: 457 INPTFICDHPQI 468
>D31890-1|BAA06688.1| 601|Homo sapiens KIAA0070 protein.
Length = 601
Score = 168 bits (409), Expect = 1e-41
Identities = 72/84 (85%), Positives = 81/84 (96%)
Frame = +3
Query: 9 FLDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVY 188
FLD +GFLE+ETP+MN++PGGA AKPFIT+HNEL+M+LYMRIAPELYHKMLVVGG+DRVY
Sbjct: 261 FLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVY 320
Query: 189 EIGRQFRNEGIDLTHNPEFTTCNF 260
EIGRQFRNEGIDLTHNPEFTTC F
Sbjct: 321 EIGRQFRNEGIDLTHNPEFTTCEF 344
Score = 120 bits (288), Expect = 7e-27
Identities = 62/132 (46%), Positives = 80/132 (60%), Gaps = 3/132 (2%)
Frame = +2
Query: 257 FYMAYADYNDLMTITESILSGMVQSIHGSYKVKYHPEGPEGKEIEIDFTPPFARVPMMAT 436
FYMAYADY+DLM ITE ++SGMV+ I GSYKV YHP+GPEG+ ++DFTPPF R+ M+
Sbjct: 344 FYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDVDFTPPFRRINMVEE 403
Query: 437 LERVLNVKLPAPDKLDTPEANDFLTTYATLIRMSARHRGPPR--GSWINWFL-YFWREEC 607
LE+ L +KLP + +T E L A PPR ++ + F C
Sbjct: 404 LEKALGMKLPETNLFETEETRKILDDICV---AKAVECPPPRTTARLLDKLVGEFLEVTC 460
Query: 608 INPHLLXDHPQI 643
INP + DHPQI
Sbjct: 461 INPTFICDHPQI 472
>BC004132-1|AAH04132.1| 597|Homo sapiens lysyl-tRNA synthetase
protein.
Length = 597
Score = 168 bits (409), Expect = 1e-41
Identities = 72/84 (85%), Positives = 81/84 (96%)
Frame = +3
Query: 9 FLDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVY 188
FLD +GFLE+ETP+MN++PGGA AKPFIT+HNEL+M+LYMRIAPELYHKMLVVGG+DRVY
Sbjct: 257 FLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVY 316
Query: 189 EIGRQFRNEGIDLTHNPEFTTCNF 260
EIGRQFRNEGIDLTHNPEFTTC F
Sbjct: 317 EIGRQFRNEGIDLTHNPEFTTCEF 340
Score = 120 bits (288), Expect = 7e-27
Identities = 62/132 (46%), Positives = 80/132 (60%), Gaps = 3/132 (2%)
Frame = +2
Query: 257 FYMAYADYNDLMTITESILSGMVQSIHGSYKVKYHPEGPEGKEIEIDFTPPFARVPMMAT 436
FYMAYADY+DLM ITE ++SGMV+ I GSYKV YHP+GPEG+ ++DFTPPF R+ M+
Sbjct: 340 FYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDVDFTPPFRRINMVEE 399
Query: 437 LERVLNVKLPAPDKLDTPEANDFLTTYATLIRMSARHRGPPR--GSWINWFL-YFWREEC 607
LE+ L +KLP + +T E L A PPR ++ + F C
Sbjct: 400 LEKALGMKLPETNLFETEETRKILDDICV---AKAVECPPPRTTARLLDKLVGEFLEVTC 456
Query: 608 INPHLLXDHPQI 643
INP + DHPQI
Sbjct: 457 INPTFICDHPQI 468
>AF285758-1|AAG30114.1| 625|Homo sapiens lysyl-tRNA synthetase
protein.
Length = 625
Score = 168 bits (409), Expect = 1e-41
Identities = 72/84 (85%), Positives = 81/84 (96%)
Frame = +3
Query: 9 FLDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVY 188
FLD +GFLE+ETP+MN++PGGA AKPFIT+HNEL+M+LYMRIAPELYHKMLVVGG+DRVY
Sbjct: 285 FLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVY 344
Query: 189 EIGRQFRNEGIDLTHNPEFTTCNF 260
EIGRQFRNEGIDLTHNPEFTTC F
Sbjct: 345 EIGRQFRNEGIDLTHNPEFTTCEF 368
Score = 120 bits (288), Expect = 7e-27
Identities = 62/132 (46%), Positives = 80/132 (60%), Gaps = 3/132 (2%)
Frame = +2
Query: 257 FYMAYADYNDLMTITESILSGMVQSIHGSYKVKYHPEGPEGKEIEIDFTPPFARVPMMAT 436
FYMAYADY+DLM ITE ++SGMV+ I GSYKV YHP+GPEG+ ++DFTPPF R+ M+
Sbjct: 368 FYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDVDFTPPFRRINMVEE 427
Query: 437 LERVLNVKLPAPDKLDTPEANDFLTTYATLIRMSARHRGPPR--GSWINWFL-YFWREEC 607
LE+ L +KLP + +T E L A PPR ++ + F C
Sbjct: 428 LEKALGMKLPETNLFETEETRKILDDICV---AKAVECPPPRTTARLLDKLVGEFLEVTC 484
Query: 608 INPHLLXDHPQI 643
INP + DHPQI
Sbjct: 485 INPTFICDHPQI 496
>AK126584-1|BAC86604.1| 423|Homo sapiens protein ( Homo sapiens
cDNA FLJ44621 fis, clone BRACE2016896, highly similar
to Lysyl-tRNA synthetase (EC 6.1.1.6). ).
Length = 423
Score = 165 bits (401), Expect = 1e-40
Identities = 71/84 (84%), Positives = 80/84 (95%)
Frame = +3
Query: 9 FLDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVY 188
FLD +GFLE+ETP+MN++P GA AKPFIT+HNEL+M+LYMRIAPELYHKMLVVGG+DRVY
Sbjct: 127 FLDELGFLEIETPMMNIIPEGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVY 186
Query: 189 EIGRQFRNEGIDLTHNPEFTTCNF 260
EIGRQFRNEGIDLTHNPEFTTC F
Sbjct: 187 EIGRQFRNEGIDLTHNPEFTTCEF 210
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +2
Query: 257 FYMAYADYNDLMTITESILSGMVQ 328
FYMAYADY+DLM ITE ++SGMV+
Sbjct: 210 FYMAYADYHDLMEITEKMVSGMVK 233
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = +1
Query: 511 NLCNTHQNECSPPRTTARLLDKLVSVFLEGGVYKSAFI 624
++C EC PPRTTARLLDKLV FLE FI
Sbjct: 251 DICVAKAVECPPPRTTARLLDKLVGEFLEVTCINPTFI 288
>BC045173-1|AAH45173.1| 645|Homo sapiens DARS2 protein protein.
Length = 645
Score = 57.2 bits (132), Expect = 5e-08
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +3
Query: 9 FLDNM-GFLEVETP-LMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDR 182
+L N+ GF+++ETP L PGGA K F+ E + +P+ + ++L+VGGLDR
Sbjct: 200 YLCNLHGFVDIETPTLFKRTPGGA--KEFLVPSREPGKFYSLPQSPQQFKQLLMVGGLDR 257
Query: 183 VYEIGRQFRNEGIDLTHNPEFT 248
+++ R +R+EG PEFT
Sbjct: 258 YFQVARCYRDEGSRPDRQPEFT 279
>AL109921-4|CAI20380.1| 645|Homo sapiens aspartyl-tRNA synthetase
2, mitochondrial protein.
Length = 645
Score = 57.2 bits (132), Expect = 5e-08
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +3
Query: 9 FLDNM-GFLEVETP-LMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDR 182
+L N+ GF+++ETP L PGGA K F+ E + +P+ + ++L+VGGLDR
Sbjct: 200 YLCNLHGFVDIETPTLFKRTPGGA--KEFLVPSREPGKFYSLPQSPQQFKQLLMVGGLDR 257
Query: 183 VYEIGRQFRNEGIDLTHNPEFT 248
+++ R +R+EG PEFT
Sbjct: 258 YFQVARCYRDEGSRPDRQPEFT 279
>AK022754-1|BAB14228.1| 463|Homo sapiens protein ( Homo sapiens
cDNA FLJ12692 fis, clone NT2RM4002623, weakly similar to
ASPARTYL-TRNA SYNTHETASE (EC 6.1.1.12). ).
Length = 463
Score = 57.2 bits (132), Expect = 5e-08
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +3
Query: 9 FLDNM-GFLEVETP-LMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDR 182
+L N+ GF+++ETP L PGGA K F+ E + +P+ + ++L+VGGLDR
Sbjct: 18 YLCNLHGFVDIETPTLFKRTPGGA--KEFLVPSREPGKFYSLPQSPQQFKQLLMVGGLDR 75
Query: 183 VYEIGRQFRNEGIDLTHNPEFT 248
+++ R +R+EG PEFT
Sbjct: 76 YFQVARCYRDEGSRPDRQPEFT 97
>AK001376-1|BAA91658.1| 463|Homo sapiens protein ( Homo sapiens
cDNA FLJ10514 fis, clone NT2RP2000710, weakly similar to
ASPARTYL-TRNA SYNTHETASE (EC 6.1.1.12). ).
Length = 463
Score = 57.2 bits (132), Expect = 5e-08
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +3
Query: 9 FLDNM-GFLEVETP-LMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDR 182
+L N+ GF+++ETP L PGGA K F+ E + +P+ + ++L+VGGLDR
Sbjct: 18 YLCNLHGFVDIETPTLFKRTPGGA--KEFLVPSREPGKFCSLPQSPQQFKQLLMVGGLDR 75
Query: 183 VYEIGRQFRNEGIDLTHNPEFT 248
+++ R +R+EG PEFT
Sbjct: 76 YFQVARCYRDEGSRPDRQPEFT 97
>J05032-1|AAA35567.1| 500|Homo sapiens protein ( Human
aspartyl-tRNA synthetase alpha-2 subunit mRNA, complete
cds. ).
Length = 500
Score = 39.9 bits (89), Expect = 0.009
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +3
Query: 12 LDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVYE 191
L N GF+E++TP + A F + + N Y+ +P+LY +M + ++V+
Sbjct: 209 LINKGFVEIQTPKIISAASEGGANVFTVSYFKNN--AYLAQSPQLYKQMCICADFEKVFS 266
Query: 192 IGRQFRNEGIDL-THNPEFTTCN----FTWHMRIIM 284
IG FR E + H EF + F +H +M
Sbjct: 267 IGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVM 302
>BT006710-1|AAP35356.1| 501|Homo sapiens aspartyl-tRNA synthetase
protein.
Length = 501
Score = 39.9 bits (89), Expect = 0.009
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +3
Query: 12 LDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVYE 191
L N GF+E++TP + A F + + N Y+ +P+LY +M + ++V+
Sbjct: 210 LINKGFVEIQTPKIISAASEGGANVFTVSYFKNN--AYLAQSPQLYKQMCICADFEKVFS 267
Query: 192 IGRQFRNEGIDL-THNPEFTTCN----FTWHMRIIM 284
IG FR E + H EF + F +H +M
Sbjct: 268 IGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVM 303
>BC107749-1|AAI07750.1| 501|Homo sapiens aspartyl-tRNA synthetase
protein.
Length = 501
Score = 39.9 bits (89), Expect = 0.009
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +3
Query: 12 LDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVYE 191
L N GF+E++TP + A F + + N Y+ +P+LY +M + ++V+
Sbjct: 210 LINKGFVEIQTPKIISAASEGGANVFTVSYFKNN--AYLAQSPQLYKQMCICADFEKVFS 267
Query: 192 IGRQFRNEGIDL-THNPEFTTCN----FTWHMRIIM 284
IG FR E + H EF + F +H +M
Sbjct: 268 IGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVM 303
>BC000629-1|AAH00629.1| 501|Homo sapiens aspartyl-tRNA synthetase
protein.
Length = 501
Score = 39.9 bits (89), Expect = 0.009
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +3
Query: 12 LDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVYE 191
L N GF+E++TP + A F + + N Y+ +P+LY +M + ++V+
Sbjct: 210 LINKGFVEIQTPKIISAASEGGANVFTVSYFKNN--AYLAQSPQLYKQMCICADFEKVFS 267
Query: 192 IGRQFRNEGIDL-THNPEFTTCN----FTWHMRIIM 284
IG FR E + H EF + F +H +M
Sbjct: 268 IGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVM 303
>AY762100-1|AAX07827.1| 501|Homo sapiens cell
proliferation-inducing protein 40 protein.
Length = 501
Score = 39.9 bits (89), Expect = 0.009
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +3
Query: 12 LDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVYE 191
L N GF+E++TP + A F + + N Y+ +P+LY +M + ++V+
Sbjct: 210 LINKGFVEIQTPKIISAASEGGANVFTVSYFKNN--AYLAQSPQLYKQMCICADFEKVFS 267
Query: 192 IGRQFRNEGIDL-THNPEFTTCN----FTWHMRIIM 284
IG FR E + H EF + F +H +M
Sbjct: 268 IGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVM 303
>AK222476-1|BAD96196.1| 501|Homo sapiens aspartyl-tRNA synthetase
variant protein.
Length = 501
Score = 39.9 bits (89), Expect = 0.009
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +3
Query: 12 LDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVYE 191
L N GF+E++TP + A F + + N Y+ +P+LY +M + ++V+
Sbjct: 210 LINKGFVEIQTPKIISAASEGGANVFTVSYFKNN--AYLAQSPQLYKQMCICADFEKVFS 267
Query: 192 IGRQFRNEGIDL-THNPEFTTCN----FTWHMRIIM 284
IG FR E + H EF + F +H +M
Sbjct: 268 IGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVM 303
>AC011999-2|AAY15029.1| 313|Homo sapiens unknown protein.
Length = 313
Score = 39.9 bits (89), Expect = 0.009
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +3
Query: 12 LDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVYE 191
L N GF+E++TP + A F + + N Y+ +P+LY +M + ++V+
Sbjct: 22 LINKGFVEIQTPKIISAASEGGANVFTVSYFKNN--AYLAQSPQLYKQMCICADFEKVFS 79
Query: 192 IGRQFRNEGIDL-THNPEFTTCN----FTWHMRIIM 284
IG FR E + H EF + F +H +M
Sbjct: 80 IGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVM 115
>Z97192-3|CAI20086.1| 183|Homo sapiens chromosome 22 open reading
frame 34 protein.
Length = 183
Score = 31.9 bits (69), Expect = 2.3
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = -2
Query: 688 LGTISDGYLREGDFINLRMIX**MRIYTLLPPEIQKPIYPRASRWSSVASTHSDE----- 524
LGTI G EG + N + + L P Q+ ++ + W+ V S H +
Sbjct: 25 LGTILRGGAEEGSYDNWPHTR---KSWGPLSPGHQRELWTQPDPWTEVLSGHKGDAGACG 81
Query: 523 CCIGCKEIISFRC 485
CC C + I+ RC
Sbjct: 82 CCCFCSQFINARC 94
>Z97192-2|CAO03381.1| 195|Homo sapiens chromosome 22 open reading
frame 34 protein.
Length = 195
Score = 31.9 bits (69), Expect = 2.3
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = -2
Query: 688 LGTISDGYLREGDFINLRMIX**MRIYTLLPPEIQKPIYPRASRWSSVASTHSDE----- 524
LGTI G EG + N + + L P Q+ ++ + W+ V S H +
Sbjct: 24 LGTILRGGAEEGSYDNWPHTR---KSWGPLSPGHQRELWTQPDPWTEVLSGHKGDAGACG 80
Query: 523 CCIGCKEIISFRC 485
CC C + I+ RC
Sbjct: 81 CCCFCSQFINARC 93
>AK124962-1|BAC86007.1| 151|Homo sapiens protein ( Homo sapiens
cDNA FLJ42972 fis, clone BRSTN2019129. ).
Length = 151
Score = 31.9 bits (69), Expect = 2.3
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = -2
Query: 688 LGTISDGYLREGDFINLRMIX**MRIYTLLPPEIQKPIYPRASRWSSVASTHSDE----- 524
LGTI G EG + N + + L P Q+ ++ + W+ V S H +
Sbjct: 24 LGTILRGGAEEGSYDNWPHTR---KSWGPLSPGHQRELWTQPDPWTEVLSGHKGDAGACG 80
Query: 523 CCIGCKEIISFRC 485
CC C + I+ RC
Sbjct: 81 CCCFCSQFINARC 93
>AB032953-1|BAA86441.2| 2144|Homo sapiens KIAA1127 protein protein.
Length = 2144
Score = 30.3 bits (65), Expect = 6.9
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2
Query: 88 NGLAVAPPGTIFISGVSTSRKPILSKNXP 2
+ LAVAP GTI+I+ + R +SKN P
Sbjct: 917 SSLAVAPDGTIYIADLGNIRIRAVSKNKP 945
>CT841517-1|CAJ86447.1| 2151|Homo sapiens dJ694E4.2 protein.
Length = 2151
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 326 QSIHGSYKVKYHPEGPEGKEIEIDFTPPFARVPMMATLERVLN--VKLPAPDKL 481
++IH S +K EG EGKE ++ F + + + LN V +P P+K+
Sbjct: 888 KTIHTSSSIKLSEEGLEGKEQDVSKETVFCKYNISDHAIQELNQTVNIPGPEKV 941
>AL031255-4|CAI22448.1| 2151|Homo sapiens chromosome 22 open reading
frame 30 protein.
Length = 2151
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 326 QSIHGSYKVKYHPEGPEGKEIEIDFTPPFARVPMMATLERVLN--VKLPAPDKL 481
++IH S +K EG EGKE ++ F + + + LN V +P P+K+
Sbjct: 888 KTIHTSSSIKLSEEGLEGKEQDVSKETVFCKYNISDHAIQELNQTVNIPGPEKV 941
>AK026712-1|BAB15536.1| 546|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23059 fis, clone LNG03912. ).
Length = 546
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 326 QSIHGSYKVKYHPEGPEGKEIEIDFTPPFARVPMMATLERVLN--VKLPAPDKL 481
++IH S +K EG EGKE ++ F + + + LN V +P P+K+
Sbjct: 257 KTIHTSSSIKLSEEGLEGKEQDVSKETVFCKYNISDHAIQELNQTVNIPGPEKV 310
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,349,576
Number of Sequences: 237096
Number of extensions: 2639970
Number of successful extensions: 4328
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4320
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -