Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1345
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089547-1|AAL90285.1|  574|Drosophila melanogaster LD23509p pro...   170   1e-42
AE014298-1351|AAF46510.2|  607|Drosophila melanogaster CG12141-P...   170   1e-42
AE014298-1350|AAN09255.1|  574|Drosophila melanogaster CG12141-P...   170   1e-42
AY119180-1|AAM51040.1| 1082|Drosophila melanogaster SD02215p pro...    52   6e-07
AE014134-2794|AAF53577.3| 1082|Drosophila melanogaster CG31739-P...    52   6e-07
AY070532-1|AAL48003.1|  531|Drosophila melanogaster GM14334p pro...    38   0.010
AF113612-1|AAD21582.1|  531|Drosophila melanogaster aspartyl tRN...    38   0.010
AE013599-1606|AAF58445.1|  531|Drosophila melanogaster CG3821-PA...    38   0.010
AY058580-1|AAL13809.1|  453|Drosophila melanogaster LD27389p pro...    33   0.49 
AF012089-2|AAB65750.2|  452|Drosophila melanogaster phenylalanyl...    33   0.49 
AE013599-1806|AAF58310.1|  453|Drosophila melanogaster CG13348-P...    33   0.49 

>AY089547-1|AAL90285.1|  574|Drosophila melanogaster LD23509p
           protein.
          Length = 574

 Score =  170 bits (414), Expect = 1e-42
 Identities = 73/84 (86%), Positives = 80/84 (95%)
 Frame = +3

Query: 9   FLDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVY 188
           FLD +GFLE+ETP+MNM+ GGATAKPF+THHN+L MDL+MRIAPELYHKMLVVGGLDRVY
Sbjct: 240 FLDRLGFLEIETPMMNMIAGGATAKPFVTHHNDLKMDLFMRIAPELYHKMLVVGGLDRVY 299

Query: 189 EIGRQFRNEGIDLTHNPEFTTCNF 260
           EIGRQFRNEGIDLTHNPEFTTC F
Sbjct: 300 EIGRQFRNEGIDLTHNPEFTTCEF 323



 Score =  133 bits (321), Expect = 3e-31
 Identities = 65/129 (50%), Positives = 80/129 (62%)
 Frame = +2

Query: 257 FYMAYADYNDLMTITESILSGMVQSIHGSYKVKYHPEGPEGKEIEIDFTPPFARVPMMAT 436
           FYMAYADY D+M ITE ++SGMV++I GSYKV YHPEGPEG E E+DFTPPF RV M+ T
Sbjct: 323 FYMAYADYADIMDITEQLVSGMVKAIRGSYKVIYHPEGPEGPEQELDFTPPFKRVSMIKT 382

Query: 437 LERVLNVKLPAPDKLDTPEANDFLTTYATLIRMSARHRGPPRGSWINWFLYFWREECINP 616
           LE  L VK PA D  ++PE N FL+      ++                  F  E C+NP
Sbjct: 383 LEEKLQVKFPAADTFNSPETNQFLSQLCAKHQVECPAPRTTARLLDKLVGEFIEEFCVNP 442

Query: 617 HLLXDHPQI 643
             + +HPQI
Sbjct: 443 TFICEHPQI 451


>AE014298-1351|AAF46510.2|  607|Drosophila melanogaster CG12141-PB,
           isoform B protein.
          Length = 607

 Score =  170 bits (414), Expect = 1e-42
 Identities = 73/84 (86%), Positives = 80/84 (95%)
 Frame = +3

Query: 9   FLDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVY 188
           FLD +GFLE+ETP+MNM+ GGATAKPF+THHN+L MDL+MRIAPELYHKMLVVGGLDRVY
Sbjct: 273 FLDRLGFLEIETPMMNMIAGGATAKPFVTHHNDLKMDLFMRIAPELYHKMLVVGGLDRVY 332

Query: 189 EIGRQFRNEGIDLTHNPEFTTCNF 260
           EIGRQFRNEGIDLTHNPEFTTC F
Sbjct: 333 EIGRQFRNEGIDLTHNPEFTTCEF 356



 Score =  133 bits (321), Expect = 3e-31
 Identities = 65/129 (50%), Positives = 80/129 (62%)
 Frame = +2

Query: 257 FYMAYADYNDLMTITESILSGMVQSIHGSYKVKYHPEGPEGKEIEIDFTPPFARVPMMAT 436
           FYMAYADY D+M ITE ++SGMV++I GSYKV YHPEGPEG E E+DFTPPF RV M+ T
Sbjct: 356 FYMAYADYADIMDITEQLVSGMVKAIRGSYKVIYHPEGPEGPEQELDFTPPFKRVSMIKT 415

Query: 437 LERVLNVKLPAPDKLDTPEANDFLTTYATLIRMSARHRGPPRGSWINWFLYFWREECINP 616
           LE  L VK PA D  ++PE N FL+      ++                  F  E C+NP
Sbjct: 416 LEEKLQVKFPAADTFNSPETNQFLSQLCAKHQVECPAPRTTARLLDKLVGEFIEEFCVNP 475

Query: 617 HLLXDHPQI 643
             + +HPQI
Sbjct: 476 TFICEHPQI 484


>AE014298-1350|AAN09255.1|  574|Drosophila melanogaster CG12141-PA,
           isoform A protein.
          Length = 574

 Score =  170 bits (414), Expect = 1e-42
 Identities = 73/84 (86%), Positives = 80/84 (95%)
 Frame = +3

Query: 9   FLDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVY 188
           FLD +GFLE+ETP+MNM+ GGATAKPF+THHN+L MDL+MRIAPELYHKMLVVGGLDRVY
Sbjct: 240 FLDRLGFLEIETPMMNMIAGGATAKPFVTHHNDLKMDLFMRIAPELYHKMLVVGGLDRVY 299

Query: 189 EIGRQFRNEGIDLTHNPEFTTCNF 260
           EIGRQFRNEGIDLTHNPEFTTC F
Sbjct: 300 EIGRQFRNEGIDLTHNPEFTTCEF 323



 Score =  133 bits (321), Expect = 3e-31
 Identities = 65/129 (50%), Positives = 80/129 (62%)
 Frame = +2

Query: 257 FYMAYADYNDLMTITESILSGMVQSIHGSYKVKYHPEGPEGKEIEIDFTPPFARVPMMAT 436
           FYMAYADY D+M ITE ++SGMV++I GSYKV YHPEGPEG E E+DFTPPF RV M+ T
Sbjct: 323 FYMAYADYADIMDITEQLVSGMVKAIRGSYKVIYHPEGPEGPEQELDFTPPFKRVSMIKT 382

Query: 437 LERVLNVKLPAPDKLDTPEANDFLTTYATLIRMSARHRGPPRGSWINWFLYFWREECINP 616
           LE  L VK PA D  ++PE N FL+      ++                  F  E C+NP
Sbjct: 383 LEEKLQVKFPAADTFNSPETNQFLSQLCAKHQVECPAPRTTARLLDKLVGEFIEEFCVNP 442

Query: 617 HLLXDHPQI 643
             + +HPQI
Sbjct: 443 TFICEHPQI 451


>AY119180-1|AAM51040.1| 1082|Drosophila melanogaster SD02215p
           protein.
          Length = 1082

 Score = 52.4 bits (120), Expect = 6e-07
 Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = +3

Query: 12  LDNMGFLEVETP-LMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVY 188
           ++ +GF+EVETP L    PGGA  + F+    +      +  +P+ + +ML+ GG+DR +
Sbjct: 557 INYLGFVEVETPTLFRRTPGGA--QEFVVPTRKAGHFYSLVQSPQQFKQMLMSGGIDRYF 614

Query: 189 EIGRQFRNEGIDLTHNPEFT 248
           ++ R +R+E       PEFT
Sbjct: 615 QVARCYRDEATRPDRQPEFT 634


>AE014134-2794|AAF53577.3| 1082|Drosophila melanogaster CG31739-PA
           protein.
          Length = 1082

 Score = 52.4 bits (120), Expect = 6e-07
 Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = +3

Query: 12  LDNMGFLEVETP-LMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVY 188
           ++ +GF+EVETP L    PGGA  + F+    +      +  +P+ + +ML+ GG+DR +
Sbjct: 557 INYLGFVEVETPTLFRRTPGGA--QEFVVPTRKAGHFYSLVQSPQQFKQMLMSGGIDRYF 614

Query: 189 EIGRQFRNEGIDLTHNPEFT 248
           ++ R +R+E       PEFT
Sbjct: 615 QVARCYRDEATRPDRQPEFT 634


>AY070532-1|AAL48003.1|  531|Drosophila melanogaster GM14334p
           protein.
          Length = 531

 Score = 38.3 bits (85), Expect = 0.010
 Identities = 20/68 (29%), Positives = 30/68 (44%)
 Frame = +3

Query: 12  LDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVYE 191
           L   GF E+ TP +        A  F   +       Y+  +P+LY +M +    D+VY 
Sbjct: 240 LTEQGFTEIHTPKIISAASEGGANVFTVSY--FKDSAYLAQSPQLYKQMAIAADFDKVYT 297

Query: 192 IGRQFRNE 215
           +G  FR E
Sbjct: 298 VGAVFRAE 305


>AF113612-1|AAD21582.1|  531|Drosophila melanogaster aspartyl tRNA
           synthetase protein.
          Length = 531

 Score = 38.3 bits (85), Expect = 0.010
 Identities = 20/68 (29%), Positives = 30/68 (44%)
 Frame = +3

Query: 12  LDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVYE 191
           L   GF E+ TP +        A  F   +       Y+  +P+LY +M +    D+VY 
Sbjct: 240 LTEQGFTEIHTPKIISAASEGGANVFTVSY--FKDSAYLAQSPQLYKQMAIAADFDKVYT 297

Query: 192 IGRQFRNE 215
           +G  FR E
Sbjct: 298 VGAVFRAE 305


>AE013599-1606|AAF58445.1|  531|Drosophila melanogaster CG3821-PA
           protein.
          Length = 531

 Score = 38.3 bits (85), Expect = 0.010
 Identities = 20/68 (29%), Positives = 30/68 (44%)
 Frame = +3

Query: 12  LDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDRVYE 191
           L   GF E+ TP +        A  F   +       Y+  +P+LY +M +    D+VY 
Sbjct: 240 LTEQGFTEIHTPKIISAASEGGANVFTVSY--FKDSAYLAQSPQLYKQMAIAADFDKVYT 297

Query: 192 IGRQFRNE 215
           +G  FR E
Sbjct: 298 VGAVFRAE 305


>AY058580-1|AAL13809.1|  453|Drosophila melanogaster LD27389p
           protein.
          Length = 453

 Score = 32.7 bits (71), Expect = 0.49
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +3

Query: 108 LNMDLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEF 245
           +N    +R     +   L+ GGLD    +G  +R + ID TH P F
Sbjct: 131 INQQHLLRAHTTAHQVELISGGLDNFLVVGEVYRRDEIDSTHYPVF 176


>AF012089-2|AAB65750.2|  452|Drosophila melanogaster phenylalanyl
           tRNA synthetase protein.
          Length = 452

 Score = 32.7 bits (71), Expect = 0.49
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +3

Query: 108 LNMDLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEF 245
           +N    +R     +   L+ GGLD    +G  +R + ID TH P F
Sbjct: 131 INQQHLLRAHTTAHQVELISGGLDNFLVVGEVYRRDEIDSTHYPVF 176


>AE013599-1806|AAF58310.1|  453|Drosophila melanogaster CG13348-PA
           protein.
          Length = 453

 Score = 32.7 bits (71), Expect = 0.49
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +3

Query: 108 LNMDLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEF 245
           +N    +R     +   L+ GGLD    +G  +R + ID TH P F
Sbjct: 131 INQQHLLRAHTTAHQVELISGGLDNFLVVGEVYRRDEIDSTHYPVF 176


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,093,564
Number of Sequences: 53049
Number of extensions: 788798
Number of successful extensions: 1695
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1687
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)