Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1260
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   5.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   5.4  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.2  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 325 HFWNSRIGSRCTDG 366
           HFW+S  G + +DG
Sbjct: 175 HFWHSHSGFQRSDG 188


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 325 HFWNSRIGSRCTDGL 369
           HFW++  G +  DGL
Sbjct: 241 HFWHAHTGLQKMDGL 255


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 325 HFWNSRIGSRCTDGL 369
           HFW++  G +  DGL
Sbjct: 241 HFWHAHTGLQKMDGL 255


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 280 WLIYFRTCYTVCVTLLVFE 224
           W I F   +TVC TL+  +
Sbjct: 157 WNILFGHIFTVCRTLIYID 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,067
Number of Sequences: 336
Number of extensions: 2490
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)