Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1260
         (558 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39851-12|AAV58884.1|  137|Caenorhabditis elegans Hypothetical p...    73   1e-13
U39851-11|AAV58883.1|  171|Caenorhabditis elegans Hypothetical p...    73   1e-13
U39851-10|AAM22035.1|  144|Caenorhabditis elegans Hypothetical p...    73   1e-13
Z68303-1|CAC42387.1|  475|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z68303-12|CAA92644.2|  969|Caenorhabditis elegans Hypothetical p...    27   9.1  
Z68302-9|CAA92636.2|  969|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>U39851-12|AAV58884.1|  137|Caenorhabditis elegans Hypothetical
           protein C23G10.2c protein.
          Length = 137

 Score = 72.9 bits (171), Expect = 1e-13
 Identities = 37/82 (45%), Positives = 50/82 (60%)
 Frame = +2

Query: 281 VGTYSQAIXADXTLYISGILGLDRDAQMVCGGAEAQTRQALDNLXHVLEAGGAXLESXGK 460
           +G YSQA+ A  T+Y+SG LGLD     +  G   QT Q+L NL  VL+A GA   +  K
Sbjct: 19  IGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKAAGADYGNVVK 78

Query: 461 TTALLASMDDFSNFQQVYAEYF 526
           TT LL ++ DF+   +VY +YF
Sbjct: 79  TTVLLQNIADFAAVNEVYGQYF 100


>U39851-11|AAV58883.1|  171|Caenorhabditis elegans Hypothetical
           protein C23G10.2a protein.
          Length = 171

 Score = 72.9 bits (171), Expect = 1e-13
 Identities = 37/82 (45%), Positives = 50/82 (60%)
 Frame = +2

Query: 281 VGTYSQAIXADXTLYISGILGLDRDAQMVCGGAEAQTRQALDNLXHVLEAGGAXLESXGK 460
           +G YSQA+ A  T+Y+SG LGLD     +  G   QT Q+L NL  VL+A GA   +  K
Sbjct: 53  IGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKAAGADYGNVVK 112

Query: 461 TTALLASMDDFSNFQQVYAEYF 526
           TT LL ++ DF+   +VY +YF
Sbjct: 113 TTVLLQNIADFAAVNEVYGQYF 134


>U39851-10|AAM22035.1|  144|Caenorhabditis elegans Hypothetical
           protein C23G10.2b protein.
          Length = 144

 Score = 72.9 bits (171), Expect = 1e-13
 Identities = 37/82 (45%), Positives = 50/82 (60%)
 Frame = +2

Query: 281 VGTYSQAIXADXTLYISGILGLDRDAQMVCGGAEAQTRQALDNLXHVLEAGGAXLESXGK 460
           +G YSQA+ A  T+Y+SG LGLD     +  G   QT Q+L NL  VL+A GA   +  K
Sbjct: 26  IGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKAAGADYGNVVK 85

Query: 461 TTALLASMDDFSNFQQVYAEYF 526
           TT LL ++ DF+   +VY +YF
Sbjct: 86  TTVLLQNIADFAAVNEVYGQYF 107


>Z68303-1|CAC42387.1|  475|Caenorhabditis elegans Hypothetical
           protein ZK792.1b protein.
          Length = 475

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 71  IPYSYYLNTDGGIFLSFELLTYLHVRNKTELIRFCTG 181
           I +  Y ++D G+F+     T  + RNKT  IRFC G
Sbjct: 407 IVFEIYEHSDDGLFIR----TLYNGRNKTYNIRFCQG 439


>Z68303-12|CAA92644.2|  969|Caenorhabditis elegans Hypothetical
           protein ZK792.1a protein.
          Length = 969

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 71  IPYSYYLNTDGGIFLSFELLTYLHVRNKTELIRFCTGVR 187
           I +  Y ++D G+F+     T  + RNKT  IRFC   R
Sbjct: 407 IVFEIYEHSDDGLFIR----TLYNGRNKTYNIRFCQDTR 441


>Z68302-9|CAA92636.2|  969|Caenorhabditis elegans Hypothetical
           protein ZK792.1a protein.
          Length = 969

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 71  IPYSYYLNTDGGIFLSFELLTYLHVRNKTELIRFCTGVR 187
           I +  Y ++D G+F+     T  + RNKT  IRFC   R
Sbjct: 407 IVFEIYEHSDDGLFIR----TLYNGRNKTYNIRFCQDTR 441


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,065,800
Number of Sequences: 27780
Number of extensions: 233365
Number of successful extensions: 543
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)