Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1259
(528 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 141 8e-33
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 122 5e-27
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 113 2e-24
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 91 2e-17
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 90 3e-17
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 83 5e-15
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 77 3e-13
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 75 1e-12
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 59 5e-08
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 56 7e-07
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 51 1e-05
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 46 7e-04
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 44 0.003
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 41 0.015
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 41 0.015
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 38 0.19
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 36 0.44
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 36 0.76
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 35 1.0
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 35 1.3
UniRef50_Q7QTK7 Cluster: GLP_375_16023_15058; n=1; Giardia lambl... 33 5.4
UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, wh... 33 5.4
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 33 5.4
UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1; ... 32 7.1
UniRef50_A4XF13 Cluster: Transcriptional regulator, LysR family;... 32 7.1
UniRef50_UPI000023F31F Cluster: hypothetical protein FG00552.1; ... 32 9.4
UniRef50_A4H5P4 Cluster: Putative uncharacterized protein; n=1; ... 32 9.4
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 141 bits (342), Expect = 8e-33
Identities = 65/78 (83%), Positives = 72/78 (92%)
Frame = +1
Query: 10 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAK 189
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 190 QPNSAIRKCVRVQLIKNG 243
QPNSAIRKCVRVQLIKNG
Sbjct: 61 QPNSAIRKCVRVQLIKNG 78
Score = 121 bits (292), Expect = 9e-27
Identities = 58/65 (89%), Positives = 59/65 (90%)
Frame = +3
Query: 243 KESDXFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKK 422
K+ FVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK KK
Sbjct: 79 KKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKK 138
Query: 423 ERPRS 437
ERPRS
Sbjct: 139 ERPRS 143
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 122 bits (294), Expect = 5e-27
Identities = 54/77 (70%), Positives = 66/77 (85%)
Frame = +1
Query: 13 GKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQ 192
GKPRG+ +ARK HRR RWA+ +KK +GT +K++PFGG+SHAKGIVLEK+G+E+KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 193 PNSAIRKCVRVQLIKNG 243
PNSAIRKCVRVQLIKNG
Sbjct: 64 PNSAIRKCVRVQLIKNG 80
Score = 108 bits (260), Expect = 7e-23
Identities = 50/65 (76%), Positives = 57/65 (87%)
Frame = +3
Query: 243 KESDXFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKK 422
K+ FVP DGCLN ++ENDEVL+AGFGRKG A GDIPGVRFKVVKV+ VSLLAL+KEKK
Sbjct: 81 KKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKK 140
Query: 423 ERPRS 437
E+PRS
Sbjct: 141 EKPRS 145
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 113 bits (272), Expect = 2e-24
Identities = 51/76 (67%), Positives = 59/76 (77%)
Frame = +1
Query: 16 KPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQP 195
K G+ RK HRR QRWADK +KK+H G +WK PF G+SHAKGIVLEK+G+EAKQP
Sbjct: 74 KTCGMGAGRKLKTHRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQP 132
Query: 196 NSAIRKCVRVQLIKNG 243
NSAI KC RVQL+KNG
Sbjct: 133 NSAICKCARVQLVKNG 148
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 90.6 bits (215), Expect = 2e-17
Identities = 42/68 (61%), Positives = 53/68 (77%)
Frame = +1
Query: 40 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCV 219
RK V+ R+ RW+D+++ + + KA+P GA AKGIVLEKVGVEAKQPNSAIRKC+
Sbjct: 9 RKLVHDRKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCI 68
Query: 220 RVQLIKNG 243
R+QLIKNG
Sbjct: 69 RIQLIKNG 76
Score = 63.3 bits (147), Expect = 3e-09
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Frame = +3
Query: 258 FVPRDGCLNHIEENDEVLVAGFG-RKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 431
F P DG +N I+E+DEV + G G R G + GDIPGVRF+V KV +VSL + K+++P
Sbjct: 82 FCPGDGAINFIDEHDEVTIEGIGGRMGGSYGDIPGVRFRVFKVNDVSLEEMVAGKRDKP 140
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 89.8 bits (213), Expect = 3e-17
Identities = 41/46 (89%), Positives = 45/46 (97%)
Frame = +3
Query: 300 DEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 437
DEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 82.6 bits (195), Expect = 5e-15
Identities = 39/75 (52%), Positives = 52/75 (69%)
Frame = +1
Query: 19 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPN 198
P G+ K R++ RW D +K+ +G K +P GA A+GIVLEKVGVEA++PN
Sbjct: 7 PYGLFAGGKLKRKRQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 199 SAIRKCVRVQLIKNG 243
+A+RKCVRVQL+KNG
Sbjct: 67 AAVRKCVRVQLVKNG 81
Score = 71.7 bits (168), Expect = 9e-12
Identities = 33/59 (55%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = +3
Query: 258 FVPRDGCLNHIEENDEVLVAGFGR-KGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 431
FVP DG LN+I E+DEV++ G +G ++GDIPGVRFKV+KV VSL A+++ KK++P
Sbjct: 87 FVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFKVIKVNGVSLWAIWRGKKQKP 145
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 77.0 bits (181), Expect = 3e-13
Identities = 38/62 (61%), Positives = 43/62 (69%)
Frame = -3
Query: 445 YTYDLGRSFFSL*RARRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSR 266
Y YDLG SFFS +A ++T T TTL TPG+SP A PL P PA TSSFSS F+QPS
Sbjct: 3 YIYDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFSSTKFKQPSF 62
Query: 265 GT 260
GT
Sbjct: 63 GT 64
Score = 51.6 bits (118), Expect = 1e-05
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = -2
Query: 266 GDEXVTFFPFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 147
G + VTF PFL++ T TH +AE GCL S P FS+T+P A
Sbjct: 63 GTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPLA 102
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 74.5 bits (175), Expect = 1e-12
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +1
Query: 19 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPN 198
P G+ ARK R++ RW+D ++KK +G K +P GA A+GIVLEKVGVEA++PN
Sbjct: 7 PLGLYAARKLRRKRQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 199 SAIRKCVRVQLIKN 240
+A+RKCV + N
Sbjct: 67 AAVRKCVTPDTLIN 80
Score = 64.5 bits (150), Expect = 1e-09
Identities = 33/59 (55%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Frame = +3
Query: 258 FVPRDGCLNHIEENDEVLVAGFGR-KGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 431
FVP DG LN I E+DEV++ G +G A GD+PGVRFKV KV VSL A+ KK++P
Sbjct: 601 FVPWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNGVSLKAILLGKKQKP 659
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 59.3 bits (137), Expect = 5e-08
Identities = 32/80 (40%), Positives = 43/80 (53%)
Frame = -1
Query: 246 LSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLEFFVRPSL 67
L VLNEL+ DA DGR+ L F + ++LC+R T +R+ L VGFL FV P L
Sbjct: 32 LPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGTPKRIGLQGCAQVGFLVLFVMPLL 91
Query: 66 FTTVVHVLTRRSYSSGFTHL 7
+V L S ++ HL
Sbjct: 92 VPSVTAELPGSSETTTLAHL 111
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 55.6 bits (128), Expect = 7e-07
Identities = 30/79 (37%), Positives = 41/79 (51%)
Frame = -1
Query: 246 LSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLEFFVRPSL 67
L VLNEL+ DA DGR+ L F + ++LC+R +R+ L VGFL FV P L
Sbjct: 63 LPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLVLFVMPLL 122
Query: 66 FTTVVHVLTRRSYSSGFTH 10
+V L S ++ H
Sbjct: 123 VPSVTAELPGSSETTTLAH 141
Score = 40.3 bits (90), Expect = 0.027
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = -2
Query: 410 VESEERHVGYFYHLKTNSGNVTDGVTFTTESRH*YXXXXXXXX*ATVTGDEXVTFFPFL 234
++S++R++GYF HLK +S ++T +TF+T+S + + A + G E P L
Sbjct: 9 LQSQQRNIGYFNHLKEDSRDITYSMTFSTKSSN-WIIIFLNEVQAAIIGHERCDLLPVL 66
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 51.2 bits (117), Expect = 1e-05
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +3
Query: 300 DEVLVAGFGRKGHAVGDIPGVRFKVVK 380
DEVL++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 45.6 bits (103), Expect = 7e-04
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +1
Query: 124 NPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNG 243
NPF GA AKG+VL+ + + K+PNSA RKCV V+L NG
Sbjct: 83 NPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-SNG 121
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 43.6 bits (98), Expect = 0.003
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +1
Query: 100 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNG 243
H+ + NP G AKG+VL+ V + K+PNSA RKCV V+L NG
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNG 59
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 41.1 bits (92), Expect = 0.015
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +1
Query: 100 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 231
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL 99
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 41.1 bits (92), Expect = 0.015
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +1
Query: 100 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 231
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL 85
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 37.5 bits (83), Expect = 0.19
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1
Query: 100 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNG 243
H+ + P G KG+VL+ + + K+PNSA RKCV V+L NG
Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL-SNG 106
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 36.3 bits (80), Expect = 0.44
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 127 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNG 243
P G KG+VL+ + + K+PNSA RKC RV+L NG
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNG 99
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 35.5 bits (78), Expect = 0.76
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1
Query: 136 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 231
G SH KGIVL+ V K+PNS RKC V+L
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL 103
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 35.1 bits (77), Expect = 1.0
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +1
Query: 118 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 231
K P G KG+VL + K+PNSA RKC RV+L
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL 85
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 34.7 bits (76), Expect = 1.3
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = +1
Query: 151 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNG 243
+G++L + ++ K+PNSA+RKC RV+L NG
Sbjct: 90 RGVILRIMILKPKKPNSALRKCARVRL-SNG 119
>UniRef50_Q7QTK7 Cluster: GLP_375_16023_15058; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_375_16023_15058 - Giardia lamblia
ATCC 50803
Length = 321
Score = 32.7 bits (71), Expect = 5.4
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = -3
Query: 403 ARRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNXSLSF 242
A + LA FT +RTPG + TA +T TSSF + R + T S ++
Sbjct: 122 ATQSPLARFTRARRTPGTASTASTASGTTSTRTSSFPAGATRATATATRPSFAW 175
>UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_29,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 107
Score = 32.7 bits (71), Expect = 5.4
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 43 KHVNHRREQ--RWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKC 216
K H+R Q W K+F K + T+ + G H KG+++ K G + N + +
Sbjct: 26 KITKHKRVQGRAWRRKQFNKRKVQTQLQKTLVGQQIHLKGVLVHKKGPNWHKGNKQLLEK 85
Query: 217 VRVQLIK 237
+++L++
Sbjct: 86 EKIELVQ 92
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 32.7 bits (71), Expect = 5.4
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1
Query: 112 KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNG 243
K KA G +G+ + V K+PNSA+RK RV+L NG
Sbjct: 18 KSKAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNG 60
>UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1;
Mesorhizobium sp. BNC1|Rep: Putative uncharacterized
protein - Mesorhizobium sp. (strain BNC1)
Length = 338
Score = 32.3 bits (70), Expect = 7.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 242 PFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 147
P + R+H ++ E+ C + P +S T+PFA
Sbjct: 240 PTAFNSARSHNKILEIACFGAAPVYSSTVPFA 271
>UniRef50_A4XF13 Cluster: Transcriptional regulator, LysR family;
n=1; Novosphingobium aromaticivorans DSM 12444|Rep:
Transcriptional regulator, LysR family - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 315
Score = 32.3 bits (70), Expect = 7.1
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 40 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQ 192
R+H + W EF A G W ANP G A+ A G+V + KQ
Sbjct: 193 RRHAGALQSLGWG-YEFDAALPGGPWSANPAGEAAQAAGLVTFNAWPQLKQ 242
>UniRef50_UPI000023F31F Cluster: hypothetical protein FG00552.1; n=1;
Gibberella zeae PH-1|Rep: hypothetical protein FG00552.1
- Gibberella zeae PH-1
Length = 1078
Score = 31.9 bits (69), Expect = 9.4
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = -3
Query: 376 TTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNXSLSFRS**AVHG 218
+T TPG S + P+ P SS S P+R T+ SLSFR A HG
Sbjct: 930 STGSATPGASTSKLPIIRGPDARASSASPR-VETPTRNTHSSLSFRERLASHG 981
>UniRef50_A4H5P4 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 1248
Score = 31.9 bits (69), Expect = 9.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -3
Query: 400 RRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTN 257
RR L F +KR+ R N A+ S +S W RQP +G++
Sbjct: 906 RRTVLGRFEAIKRSGSEKSQQHQQRTNSASLRDSLTSTWERQPQQGSS 953
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,959,676
Number of Sequences: 1657284
Number of extensions: 10937082
Number of successful extensions: 26053
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 25238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26046
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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