Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1258
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    25   0.69 
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    23   2.1  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   4.9  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   4.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   6.4  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   8.5  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -1

Query: 86  NLLIKETNSLL*IMYICHYY 27
           N LI+E++S++   Y CH+Y
Sbjct: 178 NRLIEESSSVMEAAYSCHWY 197


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 490 ENAFQKLQSHLP*LSPIAP 546
           EN FQ   SH+P   PI P
Sbjct: 93  ENGFQVQGSHIPTAPPIPP 111


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 333 FDNSVQIIDAKKGKNVLKRVQL 398
           F N  QI+D K   NV K++ +
Sbjct: 508 FSNEEQIVDLKAFNNVPKKLNM 529


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 333 FDNSVQIIDAKKGKNVLKRVQL 398
           F N  QI+D K   NV K++ +
Sbjct: 508 FSNEEQIVDLKAFNNVPKKLNM 529


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 550 EHGKIITFIMKNDFRIVRMKNGKICKGIAMG 642
           E+G + TF+  ND +   ++   + +GIA G
Sbjct: 717 ENGSLDTFLRANDGKFQVLQLVGMLRGIASG 747


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 589 FRIVRMKNGKICKGIAMGT 645
           F +V ++N  +  G+A+GT
Sbjct: 268 FNMVHIQNSTLAGGVAIGT 286


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,767
Number of Sequences: 438
Number of extensions: 3669
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)