Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1251
(379 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000196-2|AAC24253.1| 345|Caenorhabditis elegans Ribosomal pro... 85 1e-17
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 31 0.36
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 28 1.9
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 28 1.9
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 28 2.5
U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical pr... 27 3.4
AL132949-31|CAB61110.3| 297|Caenorhabditis elegans Hypothetical... 27 4.5
Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical p... 27 5.9
Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical p... 27 5.9
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 27 5.9
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 27 5.9
AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical ... 27 5.9
AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical ... 27 5.9
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical pr... 26 7.8
U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical pr... 26 7.8
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr... 26 7.8
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 26 7.8
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 26 7.8
U42439-8|AAM98032.1| 431|Caenorhabditis elegans Hypothetical pr... 26 7.8
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 26 7.8
>AF000196-2|AAC24253.1| 345|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 4 protein.
Length = 345
Score = 85.4 bits (202), Expect = 1e-17
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 369
SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG
Sbjct: 62 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 98
Score = 58.0 bits (134), Expect = 2e-09
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = +2
Query: 80 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
ARPLV+VY EK E Q + LP VF+ PIRPDLV+ + + +N RQ + V+ +AG Q
Sbjct: 3 ARPLVTVYDEKYEATQSQIR-LPAVFRTPIRPDLVSFIADQVRRNRRQAHAVNTKAGKQ 60
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 30.7 bits (66), Expect = 0.36
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 379 EHTVHHDTCYRRHPDRTYGYHHHGH 305
EH HH + H D+ +HHHGH
Sbjct: 694 EHGAHHGAHHGHHDDKE-NHHHHGH 717
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical
protein F57F4.4 protein.
Length = 2090
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = +3
Query: 252 TNQC--RIMGYRTCCCPNSAC 308
TN+C + G+ TCCC + AC
Sbjct: 867 TNRCHQQEQGFETCCCDSDAC 887
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = +3
Query: 252 TNQC--RIMGYRTCCCPNSAC 308
TN+C + G+ TCCC + AC
Sbjct: 867 TNRCHQQEQGFETCCCDSDAC 887
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 27.9 bits (59), Expect = 2.5
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 374 YGPPRHMLPKAP*PDLWVPPPRTRGIRATAR-PVPH 270
Y PPR P AP P +++PPP G R P+ H
Sbjct: 159 YPPPRGY-PPAPAPGVYMPPPGMPGAYPPPRMPIGH 193
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 27.9 bits (59), Expect = 2.5
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 374 YGPPRHMLPKAP*PDLWVPPPRTRGIRATAR-PVPH 270
Y PPR P AP P +++PPP G R P+ H
Sbjct: 159 YPPPRGY-PPAPAPGVYMPPPGMPGAYPPPRMPIGH 193
>U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical
protein F53A9.9 protein.
Length = 147
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 367 HHDTCYRRHPDRTYGYHHHGHAEFGQQH 284
HHD +++H + + HHHGH G H
Sbjct: 120 HHDGHHKKHGRKEHD-HHHGH-HHGHHH 145
>AL132949-31|CAB61110.3| 297|Caenorhabditis elegans Hypothetical
protein Y53F4B.36 protein.
Length = 297
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/58 (20%), Positives = 25/58 (43%)
Frame = +2
Query: 65 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVS 238
MS++V P +S V + + F++ P ++ D H+ + + CV+
Sbjct: 182 MSMAVTSPYLSKLDRLPIVVSACKRAMCFIYDRPTNSIILLDTHMHFKRRAVSVLCVA 239
>Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 26.6 bits (56), Expect = 5.9
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 171 RMGALNTNGRGLAAPCTVSLFSEYT-DTKGRATDRLISL 58
+ G LN NGR A F++YT T R TD SL
Sbjct: 7 KTGGLNLNGRASIAITPTKRFTDYTGSTSVRKTDARPSL 45
>Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 26.6 bits (56), Expect = 5.9
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 171 RMGALNTNGRGLAAPCTVSLFSEYT-DTKGRATDRLISL 58
+ G LN NGR A F++YT T R TD SL
Sbjct: 7 KTGGLNLNGRASIAITPTKRFTDYTGSTSVRKTDARPSL 45
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 26.6 bits (56), Expect = 5.9
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = -1
Query: 334 RTYGYHHHGHAEFGQQHVRYPMIRHWLVTSLLAHAVGLPRVLGHRNVNIIDQVRTYGRLE 155
R GY+ + RYP +R + L + A LPR++ R+ + + R + R
Sbjct: 1376 RPEGYYEPPVQTYSPVPPRYPTLRRVDDSPLRSRAKSLPRIISPRHEHFVR--RPHSRNS 1433
Query: 154 YERE 143
Y E
Sbjct: 1434 YSNE 1437
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 298 IPRVRGGGTHRSGQGAFGNMCRGG 369
+P GGG S Q A GN C GG
Sbjct: 26 LPGAGGGGCCSSAQPACGNPCGGG 49
>AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical
protein M01B12.4b protein.
Length = 644
Score = 26.6 bits (56), Expect = 5.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -2
Query: 180 RSGRMGALNTNGRGLAAPCTVSLFSEYTDTK--GRATDRL 67
R R+ A+ RG+A+P T +L D K GRA D L
Sbjct: 568 RKSRLAAILAKSRGMASPMTNTLPPTADDIKESGRANDVL 607
>AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical
protein M01B12.4a protein.
Length = 634
Score = 26.6 bits (56), Expect = 5.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -2
Query: 180 RSGRMGALNTNGRGLAAPCTVSLFSEYTDTK--GRATDRL 67
R R+ A+ RG+A+P T +L D K GRA D L
Sbjct: 558 RKSRLAAILAKSRGMASPMTNTLPPTADDIKESGRANDVL 597
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 128 PAPSHSSLNTPTLKVGLPIDSFRYFSEAIPPK 33
P S +S N PT+K+ L I+ YF PK
Sbjct: 184 PTTSSTSTNAPTIKITLNIND-AYFDSNCAPK 214
>Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical
protein R01E6.5 protein.
Length = 245
Score = 26.2 bits (55), Expect = 7.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 376 HTVHHDTCYRRHPDRTYGYHHHGHAEFGQQH 284
H +D ++ D T GY++ G+ +GQ H
Sbjct: 168 HKSKYDDNEGKYGDHTDGYYNKGYDNYGQGH 198
>U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical
protein F45E4.3b protein.
Length = 836
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 143 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQP 259
+P + K + DLV VH+SM S S H P
Sbjct: 249 IPNIVKCDLPADLVRGVHISMQPPSPAVSAFSPRRYHHP 287
>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
protein F45E4.3a protein.
Length = 1231
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 143 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQP 259
+P + K + DLV VH+SM S S H P
Sbjct: 249 IPNIVKCDLPADLVRGVHISMQPPSPAVSAFSPRRYHHP 287
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 26.2 bits (55), Expect = 7.8
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +1
Query: 217 EAALLREQGGWSPTSAESWGTGRAVARIPRVRGG----GTHRSGQGAFGNMCRGG 369
EA + + G ++PTS+ G G RGG G R G+G +G RGG
Sbjct: 654 EAKVAKGFGQFAPTSSAYGGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGG 708
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 26.2 bits (55), Expect = 7.8
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +1
Query: 217 EAALLREQGGWSPTSAESWGTGRAVARIPRVRGG----GTHRSGQGAFGNMCRGG 369
EA + + G ++PTS+ G G RGG G R G+G +G RGG
Sbjct: 695 EAKVAKGFGQFAPTSSAYGGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGG 749
>U42439-8|AAM98032.1| 431|Caenorhabditis elegans Hypothetical
protein F19C7.8a protein.
Length = 431
Score = 26.2 bits (55), Expect = 7.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 331 TYGYHHHGHAEFGQQHVRYPMIR 263
T+GYHH+ HA Q + + R
Sbjct: 67 THGYHHNPHARLSQPDIHSAIYR 89
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 26.2 bits (55), Expect = 7.8
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +1
Query: 217 EAALLREQGGWSPTSAESWGTGRAVARIPRVRGG----GTHRSGQGAFGNMCRGG 369
EA + + G ++PTS+ G G RGG G R G+G +G RGG
Sbjct: 654 EAKVAKGFGQFAPTSSAYGGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGG 708
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,930,395
Number of Sequences: 27780
Number of extensions: 198456
Number of successful extensions: 664
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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