Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1248
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.36 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.36 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.36 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.36 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.63 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.63 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.63 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   1.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 233  YVALVKM**IITFFIAVILVIQYFAFVLYK 144
            Y+ L  +  +  FF A+ILVIQ+ A + ++
Sbjct: 1320 YLQLEPIGLVFVFFFALILVIQFVAMLFHR 1349


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 233  YVALVKM**IITFFIAVILVIQYFAFVLYK 144
            Y+ L  +  +  FF A+ILVIQ+ A + ++
Sbjct: 1320 YLQLEPIGLVFVFFFALILVIQFVAMLFHR 1349


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 233  YVALVKM**IITFFIAVILVIQYFAFVLYK 144
            Y+ L  +  +  FF A+ILVIQ+ A + ++
Sbjct: 1320 YLQLEPIGLVFVFFFALILVIQFVAMLFHR 1349


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 233  YVALVKM**IITFFIAVILVIQYFAFVLYK 144
            Y+ L  +  +  FF A+ILVIQ+ A + ++
Sbjct: 1320 YLQLEPIGLVFVFFFALILVIQFVAMLFHR 1349


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = -2

Query: 233  YVALVKM**IITFFIAVILVIQYFAFVLYK 144
            Y+ L  +  +   F A+++VIQ+FA ++++
Sbjct: 1277 YLQLEPIGFVFLIFFALLMVIQFFAMMIHR 1306


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = -2

Query: 233  YVALVKM**IITFFIAVILVIQYFAFVLYK 144
            Y+ L  +  +   F A+++VIQ+FA ++++
Sbjct: 1277 YLQLEPIGFVFLIFFALLMVIQFFAMMIHR 1306


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 130 TNFIRLYNTKAKY*ITRITAIKNVII 207
           T +I L N +AKY  T I  IKN +I
Sbjct: 235 TLYIILTNNQAKYCTTLIGLIKNCVI 260


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -3

Query: 427 LMRKNGLAQQYCHIYFSQHNYMSFASVLV*LGVLF 323
           L+  NG+  + C++ FS ++   F S ++  G +F
Sbjct: 209 LLPVNGVTSEKCNLTFSWYSKKVFYSKIIISGSIF 243


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 442 IV*TCLMRKNGLAQQYCHIYFS 377
           I+  CL++ N +   +C+ Y+S
Sbjct: 538 IIIGCLIQFNTIVFAFCYCYYS 559


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,635
Number of Sequences: 336
Number of extensions: 1736
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)