Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1245
(548 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54110| Best HMM Match : Hexapep (HMM E-Value=9.8e-14) 30 1.4
SB_47241| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_37123| Best HMM Match : Extensin_2 (HMM E-Value=1.5) 30 1.4
SB_19312| Best HMM Match : DEP (HMM E-Value=2.5e-09) 29 2.5
SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0) 29 2.5
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 2.5
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_47814| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_56403| Best HMM Match : fn3 (HMM E-Value=1.5e-29) 29 3.3
SB_57837| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_38050| Best HMM Match : Hexapep (HMM E-Value=0.04) 28 5.8
SB_34483| Best HMM Match : Hexapep (HMM E-Value=0.0027) 28 5.8
SB_57482| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 28 5.8
SB_36300| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_18557| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3) 28 5.8
SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092) 28 5.8
SB_58977| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_19380| Best HMM Match : DUF827 (HMM E-Value=0.06) 27 7.6
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_54110| Best HMM Match : Hexapep (HMM E-Value=9.8e-14)
Length = 729
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -2
Query: 265 MLDFIIALAGHVLQDLLNVEDGDAFVSVIDVV 170
+LD + + G L D ++VEDGDA + +DVV
Sbjct: 125 LLDDVDVVDGATLLDDVDVEDGDAMLDDVDVV 156
>SB_47241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 29.9 bits (64), Expect = 1.4
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = +2
Query: 107 DNEIPRDIDDGK----ASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGDYEVKHQRW 274
D + +D DD A+ V++ DY DD D ++NV+ +L AS Y KH
Sbjct: 49 DYDEVKDNDDNNVGDLANGVVADENDYDDDCDNYDYLINVEGLLYMNASLWKYMEKH--- 105
Query: 275 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGP 376
K + S + +S ++ + P +T Q P
Sbjct: 106 -KVKQDSKAFQLLSKLLVMDPNKRITSEQALQDP 138
>SB_37123| Best HMM Match : Extensin_2 (HMM E-Value=1.5)
Length = 318
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 314 SPVMPVQPLTSLTLTQTA--SGPETSPASDNLSVPSSDTWDKT 436
SP+ Q +S LTQT S + DNLS P + TWD +
Sbjct: 178 SPLTQTQDNSSSPLTQTQDISSSPLNQTWDNLSCPLTQTWDNS 220
Score = 27.9 bits (59), Expect = 5.8
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +2
Query: 314 SPVMPVQPLTSLTLTQT---ASGPETSPASDNLSVPSSDTWDKT*ILSINSXSTLVNSDT 484
SP+ +S LTQT +S P T DNLS P + TWD + S T NS +
Sbjct: 35 SPLTQTWDNSSSPLTQTWDNSSSPLTQ-TWDNLSSPLTQTWDNS---SSPLTQTWDNSSS 90
Query: 485 LSDQPW 502
Q W
Sbjct: 91 PLTQTW 96
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 347 LTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSXSTLVNSDTLSDQPW 502
LT T+ S + DNLS P + TWD + S T NS + Q W
Sbjct: 103 LTRTRDISSSPLTQTWDNLSSPLTQTWDNS---SSPLTQTWDNSSSPLTQTW 151
>SB_19312| Best HMM Match : DEP (HMM E-Value=2.5e-09)
Length = 678
Score = 29.1 bits (62), Expect = 2.5
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 212 VQEILKDMASQGDY-EVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSP 388
+++ LKD QGD+ E+ ++ PP + P +L + + PLTS TL AS + S
Sbjct: 278 MEQQLKDF--QGDWVEIAFTQYA-PPSVIPAFLAPDSALEMIPLTSPTLRSLASKTK-ST 333
Query: 389 ASDNLSVPSSDTWDKT*ILSINSXS 463
+++ D DK + + + S
Sbjct: 334 RRNSVRSDDIDLADKVQLFVVGNES 358
>SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0)
Length = 1182
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 271 VAQTAGIIAHLSAGIPGDACAAANVINSYTDGVRSGNFAGFRQSLGPF 414
VAQ AG IA LSA G+A +IN + V S N Q +G F
Sbjct: 364 VAQLAGSIAELSAYHHGEASLMGTIINLAENFVGSNNI-NLLQPVGQF 410
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 56 VATSAYAAPSVTINQYSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEI 223
V++ AY A VTI +YSD I++ + S W+ DD ++ LN+ ++
Sbjct: 2786 VSSKAYGA-RVTIGKYSDRAGKAAIENVEFSLCGQEGWNDWDDPRYALTYLNLDDV 2840
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 311 VSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSS 418
V+P T + +T+TA+GPET+ AS+ P +
Sbjct: 1370 VAPKSTTLASTVVPITETAAGPETTLASETTMAPKT 1405
>SB_47814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1492
Score = 28.7 bits (61), Expect = 3.3
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3
Query: 450 STRHQPWSTPILCRTSP 500
+ +H PW+TP++ RT P
Sbjct: 536 TVKHGPWNTPVVARTKP 552
>SB_56403| Best HMM Match : fn3 (HMM E-Value=1.5e-29)
Length = 236
Score = 28.7 bits (61), Expect = 3.3
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3
Query: 450 STRHQPWSTPILCRTSP 500
+ +H PW+TP++ RT P
Sbjct: 218 TVKHGPWNTPVVARTKP 234
>SB_57837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/54 (22%), Positives = 24/54 (44%)
Frame = +2
Query: 167 WDYVDDTDKSIAILNVQEILKDMASQGDYEVKHQRWPKPPELSPIYLPVSPVMP 328
W+Y K + + +L +M + G +EV+ W + + Y+ + P P
Sbjct: 311 WEYEGPDVKPLVAMFTAFVLNEMHTVGAFEVEQTCWMRAAFCNKQYIQLYPTQP 364
>SB_38050| Best HMM Match : Hexapep (HMM E-Value=0.04)
Length = 324
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -2
Query: 277 GPPLMLDFIIALAGHVLQDLLNVEDGDAFVSVIDVV 170
G PL LD + + G L D +NV DGD + +DVV
Sbjct: 147 GDPL-LDDVDVVDGVTLLDDVNVVDGDPLLDDVDVV 181
>SB_34483| Best HMM Match : Hexapep (HMM E-Value=0.0027)
Length = 323
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -2
Query: 277 GPPLMLDFIIALAGHVLQDLLNVEDGDAFVSVIDVV 170
G PL LD + + G L D +NV DGD + +DVV
Sbjct: 146 GDPL-LDDVDVVDGVTLLDDVNVVDGDPLLDDVDVV 180
>SB_57482| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 789
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 254 EVKHQRWPKPPELS-PIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDT 424
E+ Q + P + P Y P S PV S + A P + PAS S P+S T
Sbjct: 436 EISQQNYTASPTAAYPAYYPASS--PVSYPASSPASYPAFSPASYPASSPASYPASST 491
>SB_36300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 83 SVTINQYSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQE-ILKDMASQGD 250
+VT +SD + + D KA+++ S YV++ + N+QE IL D ++G+
Sbjct: 15 AVTSVDFSDPQGGKGACDRKAATIKSHIRQYVNEGHDVVTAANLQEAILADGGARGE 71
>SB_18557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 347 LTLTQTASGPETSPASDNLSVPSSDTWDKT 436
LT T+ S P + DNLS P + TWD +
Sbjct: 67 LTRTRDNSIPPLTQTWDNLSSPLTQTWDNS 96
>SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3)
Length = 509
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -1
Query: 185 CHR-RSPMHVRLRN*LFHHQCRVEFHYH 105
CHR R H+RL L +H+ R+ H+H
Sbjct: 440 CHRPRLSNHLRLSRHLHYHRRRLSIHHH 467
>SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092)
Length = 1146
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 266 QRWPKPPELSPIYLPVSPVMPVQPLTSL 349
Q+ P+PP+ + I P P M QP++SL
Sbjct: 974 QQTPQPPQPAQIMRPAHPQMISQPVSSL 1001
>SB_58977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -3
Query: 441 IQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 334
I+ ++ + E ++L + + S P+A+CVR+ SG
Sbjct: 97 IKSIARLRVEKQDQLPDEPDASNPEALCVRIKLASG 132
>SB_19380| Best HMM Match : DUF827 (HMM E-Value=0.06)
Length = 241
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 483 VSELTRVDXELIDKIQVLSHVSEEGTERLSEAGE 382
++ L + L DK++ H++E GTER ++ E
Sbjct: 61 INRLENLSVNLQDKVKNYEHLNETGTERTNQLQE 94
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 311 VSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSXSTLVNSD 481
+S + QP T+ T T + +SP+S + +P + T KT ++ + T SD
Sbjct: 1826 ISSMASAQPTTAETTASTPTSITSSPSSPSTILPETRTIPKTNVVEGGAKITPKPSD 1882
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,500,725
Number of Sequences: 59808
Number of extensions: 359718
Number of successful extensions: 1754
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1742
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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