Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1245
(548 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 30 1.3
DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin p... 30 1.3
AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin p... 30 1.3
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z75710-8|CAO82023.1| 394|Caenorhabditis elegans Hypothetical pr... 29 2.2
U61953-1|AAC48075.2| 569|Caenorhabditis elegans Hypothetical pr... 28 3.9
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 3.9
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 3.9
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 3.9
AL117204-42|CAB55146.2| 714|Caenorhabditis elegans Hypothetical... 28 3.9
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 8.9
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +2
Query: 314 SPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSXSTLVNSDTLSD 493
S V +P T+LT T TAS T P++ ++ S + + + S +S ST V + T ++
Sbjct: 421 STVTTTEPTTTLT-TSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTE 479
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +2
Query: 314 SPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSXSTLVNSDTLSD 493
S V +P T+LT T TAS T P++ ++ S + + + S +S ST V + T ++
Sbjct: 421 STVTTTEPTTTLT-TSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTE 479
>DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin
proteoglycan-4 protein.
Length = 782
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 438 QVLSHVSEEGTERLS-EAGEVSGPDAVCVRVNDVSGCTGITGDTGR*MGDNSG 283
++L H+SE+ TE S +GE+SG + N+ SG D GDNSG
Sbjct: 508 EILEHISEKSTEESSGSSGEMSGDGS----DNEASGEGSGEYDASGSSGDNSG 556
>AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin
proteoglycan protein 4 protein.
Length = 782
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 438 QVLSHVSEEGTERLS-EAGEVSGPDAVCVRVNDVSGCTGITGDTGR*MGDNSG 283
++L H+SE+ TE S +GE+SG + N+ SG D GDNSG
Sbjct: 508 EILEHISEKSTEESSGSSGEMSGDGS----DNEASGEGSGEYDASGSSGDNSG 556
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 275 PKPPEL-SPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDT 424
P PP + SP LP +P +P+T P +SPA + P++ T
Sbjct: 503 PAPPAIPSPAKLPTAPPPVEKPVTPSPSASPLPSPVSSPAPQLVQKPTTPT 553
>Z75710-8|CAO82023.1| 394|Caenorhabditis elegans Hypothetical
protein D1081.10 protein.
Length = 394
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +2
Query: 224 LKDMASQGDYEVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQTA--SGPETSPASD 397
L + + YE K KPP+ + + + PLT+ T TQ + + ++S SD
Sbjct: 45 LASLYTHDTYETKLSEMKKPPKSRYSQVHTTTPIDKSPLTTQTSTQVSVNTSSDSSKTSD 104
Query: 398 NLSVPSSDTWDKT 436
N +V + +T
Sbjct: 105 NSTVSTGTAVTET 117
>U61953-1|AAC48075.2| 569|Caenorhabditis elegans Hypothetical
protein R08C7.6 protein.
Length = 569
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 284 PELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVP 412
P++ P LPV + + S+ + + E P SD+ SVP
Sbjct: 344 PKMPPFVLPVETSVGCDNMNSVAIVHSEIDTEFRPMSDSQSVP 386
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 275 PKPPELSPIYLPVSPVMPVQPL-TSLTLTQTASGPETSPASDNLSVPSSDT 424
P P +P PV+ P T+ T T T + +T+P + ++ PS+ T
Sbjct: 669 PTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTIT 719
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 275 PKPPELSPIYLPVSPVMPVQPL-TSLTLTQTASGPETSPASDNLSVPSSDT 424
P P +P PV+ P T+ T T T + +T+P + ++ PS+ T
Sbjct: 725 PTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTIT 775
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 275 PKPPELSPIYLPVSPVMPVQPL-TSLTLTQTASGPETSPASDNLSVPSSDT 424
P P +P PV+ P T+ T T T + +T+P + ++ PS+ T
Sbjct: 548 PTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTIT 598
>AL117204-42|CAB55146.2| 714|Caenorhabditis elegans Hypothetical
protein Y116A8C.4 protein.
Length = 714
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1
Query: 401 DCLKPAKFPDLTPSV*ELMTLAAAQASPG 315
D +KPA DL PSV + M L A SPG
Sbjct: 286 DKMKPAVLDDLVPSV-DFMGLVKAMISPG 313
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 27.9 bits (59), Expect = 5.1
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 251 YEVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQTAS----GPETSPASDNLSVPSS 418
Y+ P S IYLP V+P +S+ L+ T S P+T PAS +++ ++
Sbjct: 488 YQTTDYMLPPGYPSSSIYLPQPAYPEVKPNSSVILSSTQSQNNTSPQTIPASASVTNSAT 547
Query: 419 DT 424
T
Sbjct: 548 ST 549
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 453 LIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 334
L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 725 LLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 453 LIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 334
L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 725 LLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 453 LIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 334
L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 725 LLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 453 LIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 334
L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 725 LLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical
protein T04F3.1 protein.
Length = 3517
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 329 VQPLTSLTLTQTASGPETSPASDNLSVPSSDTW 427
V P+T+ T SGP S N + SSD W
Sbjct: 846 VTPVTTTTTNMRESGPLLHENSHNQLLSSSDNW 878
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical
protein T04F3.1 protein.
Length = 3517
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 329 VQPLTSLTLTQTASGPETSPASDNLSVPSSDTW 427
V P+T+ T SGP S N + SSD W
Sbjct: 846 VTPVTTTTTNMRESGPLLHENSHNQLLSSSDNW 878
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/73 (21%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +2
Query: 287 ELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLS--VPSSDTWDKT*ILSINSX 460
++SP+ P+ P +P +PL + + + P+ +P +++ +P T+ + + + +
Sbjct: 1513 KVSPVKRPIPPSIPNEPLDIIPPVPSDNIPDPTPPTNSFGTVLPVPHTFQTS--VRVPTQ 1570
Query: 461 STLVNSDTLSDQP 499
S +S T + QP
Sbjct: 1571 SLFSSSSTTTVQP 1583
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,611,489
Number of Sequences: 27780
Number of extensions: 258137
Number of successful extensions: 938
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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