Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1245
(548 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g45330.1 68416.m04894 lectin protein kinase family protein co... 36 0.013
At2g16890.2 68415.m01944 UDP-glucoronosyl/UDP-glucosyl transfera... 34 0.072
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 31 0.38
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 29 1.5
At5g53210.1 68418.m06614 basic helix-loop-helix (bHLH) family pr... 29 2.0
At5g43560.2 68418.m05326 meprin and TRAF homology domain-contain... 29 2.0
At5g43560.1 68418.m05325 meprin and TRAF homology domain-contain... 29 2.0
At4g00560.3 68417.m00079 methionine adenosyltransferase regulato... 29 2.0
At4g00560.2 68417.m00078 methionine adenosyltransferase regulato... 29 2.0
At4g00560.1 68417.m00077 methionine adenosyltransferase regulato... 29 2.0
At3g51290.1 68416.m05614 proline-rich family protein 29 2.7
At5g66640.1 68418.m08399 LIM domain-containing protein-related c... 28 3.6
At2g39220.1 68415.m04817 patatin family protein similar to patat... 28 3.6
At2g17550.1 68415.m02031 expressed protein 28 3.6
At3g12200.1 68416.m01521 protein kinase family protein contains ... 28 4.7
At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putat... 27 6.2
At3g23510.1 68416.m02960 cyclopropane fatty acid synthase, putat... 27 6.2
At2g29690.1 68415.m03609 anthranilate synthase, alpha subunit, c... 27 6.2
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 27 8.3
At1g67310.1 68414.m07661 calmodulin-binding protein similar to a... 27 8.3
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 8.3
>At3g45330.1 68416.m04894 lectin protein kinase family protein
contains Serine/Threonine protein kinases active-site
signature, Prosite:PS00108; contains Pfam profiles
PF00069: Protein kinase domain, PF00139: Legume lectins
beta domain, PF00138: Legume lectins alpha domain
Length = 682
Score = 36.3 bits (80), Expect = 0.013
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +2
Query: 212 VQEILKDMASQGDYEVKHQRWPKPPELSP---IYLPVSPVMPVQPLTSLTLTQTASGPET 382
+ E +M Y +HQR P+ +P + PV +P +TS ++T + SGP
Sbjct: 602 IPEARPNMEQVVQYINRHQRLPEFSPNTPGIGVSTPVLMGLPSLAITSSSVTSSVSGPSA 661
Query: 383 SPASDNLSVPSSDT 424
SP+S N S+ S T
Sbjct: 662 SPSSANNSMFISHT 675
>At2g16890.2 68415.m01944 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 478
Score = 33.9 bits (74), Expect = 0.072
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = -3
Query: 501 QGWSDRVSELTRVDXELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRV 349
+G++DR+ E + + +D+ ++LSH S +G LS G S +++CV V
Sbjct: 326 EGFNDRIRESGMIVRDWVDQWEILSHESVKGF--LSHCGWNSAQESICVGV 374
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 275 PKPPELSPIYLPVSPVMPVQPLTS-LTLTQTASGPETSPASDNLSVPSSDTWD 430
P PP SP P PV P+ P TS + T S E+ S + P+ D+ D
Sbjct: 811 PPPPVFSP---PPKPVTPLPPATSPMANAPTPSSSESGEISTPVQAPTPDSED 860
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Frame = +2
Query: 281 PPELSPIYLPVSPVM-----PVQPLTSLTLTQTASGPETSPASDNLSVP 412
PP SPIY P PV PV PL T + +S S +S P
Sbjct: 802 PPPPSPIYSPPPPVFSPPPKPVTPLPPATSPMANAPTPSSSESGEISTP 850
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +2
Query: 278 KPPELSPIYLPVSPVM---PVQPLTSLTLTQTASGPETSP 388
KPP SP+ P +P + PVQP T T P T+P
Sbjct: 132 KPPTTSPVKPPTTPPVQSPPVQPPTYKPPTSPVKPPTTTP 171
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +2
Query: 281 PPELSPIYLPVSP-VMP--VQPLTSLTLTQTASGPETSPASDNLSVP 412
PP P Y P +P V P VQP T T T P TSP + P
Sbjct: 100 PPVQPPTYKPPTPTVKPPSVQPPTYKPPTPTVKPPTTSPVKPPTTPP 146
>At5g53210.1 68418.m06614 basic helix-loop-helix (bHLH) family
protein contains similarity to helix-loop-helix
DNA-binding protein
Length = 294
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 137 GKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGDYEVKHQRWPKPPELSPIYLPVS 316
G +S+I +Y+ + + + L ++ K A V P PP LSP P+S
Sbjct: 134 GDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRVVPSPRPSPPVLSPRKPPLS 193
Query: 317 PV 322
P+
Sbjct: 194 PL 195
>At5g43560.2 68418.m05326 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2
Query: 275 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPS 415
P PP P+ P+ P P+ S T TAS + ++ L P+
Sbjct: 759 PAPPMSRPLSAPIIPPTQAAPVISAVQTSTASLARSMSSTGRLGSPT 805
>At5g43560.1 68418.m05325 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2
Query: 275 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPS 415
P PP P+ P+ P P+ S T TAS + ++ L P+
Sbjct: 759 PAPPMSRPLSAPIIPPTQAAPVISAVQTSTASLARSMSSTGRLGSPT 805
>At4g00560.3 68417.m00079 methionine adenosyltransferase regulatory
beta subunit-related contains weak similarity to
methionine adenosyltransferase regulatory beta subunit
(GI:6815285) [Homo sapiens]
Length = 253
Score = 29.1 bits (62), Expect = 2.0
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +2
Query: 248 DYEVKHQRWPKPPELSPIYLPVSPVMPVQPLTSL---TLTQTASGPETSPASDNLSVPSS 418
D H P P L + P SP PV + L +++Q P+ LSVP +
Sbjct: 36 DVAFTHHSSPLPARLLDAF-PHSPAFPVDLKSGLGLNSISQDFRQPDVVVNCAALSVPRA 94
Query: 419 DTWDKT*ILSINSXSTLVN 475
D +SIN ++LVN
Sbjct: 95 CEQDPDSAMSINVPTSLVN 113
>At4g00560.2 68417.m00078 methionine adenosyltransferase regulatory
beta subunit-related contains weak similarity to
methionine adenosyltransferase regulatory beta subunit
(GI:6815285) [Homo sapiens]
Length = 201
Score = 29.1 bits (62), Expect = 2.0
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +2
Query: 248 DYEVKHQRWPKPPELSPIYLPVSPVMPVQPLTSL---TLTQTASGPETSPASDNLSVPSS 418
D H P P L + P SP PV + L +++Q P+ LSVP +
Sbjct: 36 DVAFTHHSSPLPARLLDAF-PHSPAFPVDLKSGLGLNSISQDFRQPDVVVNCAALSVPRA 94
Query: 419 DTWDKT*ILSINSXSTLVN 475
D +SIN ++LVN
Sbjct: 95 CEQDPDSAMSINVPTSLVN 113
>At4g00560.1 68417.m00077 methionine adenosyltransferase regulatory
beta subunit-related contains weak similarity to
methionine adenosyltransferase regulatory beta subunit
(GI:6815285) [Homo sapiens]
Length = 327
Score = 29.1 bits (62), Expect = 2.0
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +2
Query: 248 DYEVKHQRWPKPPELSPIYLPVSPVMPVQPLTSL---TLTQTASGPETSPASDNLSVPSS 418
D H P P L + P SP PV + L +++Q P+ LSVP +
Sbjct: 36 DVAFTHHSSPLPARLLDAF-PHSPAFPVDLKSGLGLNSISQDFRQPDVVVNCAALSVPRA 94
Query: 419 DTWDKT*ILSINSXSTLVN 475
D +SIN ++LVN
Sbjct: 95 CEQDPDSAMSINVPTSLVN 113
>At3g51290.1 68416.m05614 proline-rich family protein
Length = 602
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +2
Query: 275 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWD 430
P PP P P P+ P T+ T T T+S P P S TWD
Sbjct: 74 PPPPPPRP---PPPPLSPGSETTTWTTTTTSSVLPPPPPPPPPPPPPSSTWD 122
>At5g66640.1 68418.m08399 LIM domain-containing protein-related
contains low similarity to Pfam profile PF00412: LIM
domain
Length = 450
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -1
Query: 200 RCFC--QCHRRSPMHVRLRN*LFHHQCRVEFH 111
RC C CHR MH L+ FH C E++
Sbjct: 95 RCLCCFHCHRPFVMHEILKKGKFHIDCYKEYY 126
>At2g39220.1 68415.m04817 patatin family protein similar to
patatin-like latex allergen [Hevea
brasiliensis][PMID:10589016]; contains patatin domain
PF01734
Length = 499
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -1
Query: 404 RDCLKPAKFP--DLTPSV*ELMTLAAAQASPGIPADRWAIIPAVWA 273
+D LKP P DLT S L + A A + G W + A WA
Sbjct: 233 KDTLKPVLIPCYDLTSSAPFLFSRADALETDGYDFKLWEVCRATWA 278
>At2g17550.1 68415.m02031 expressed protein
Length = 765
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 480 SELTRVDXELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVR 352
+EL R EL ++QV + V EE + + ++ PD V VR
Sbjct: 546 NELRRQINELESEVQVRTPVEEEPIQEIETIVDLGNPDKVFVR 588
>At3g12200.1 68416.m01521 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 571
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2
Query: 290 LSPIYLPVSPVMPV 331
LSPIYLPV P+ PV
Sbjct: 283 LSPIYLPVFPIKPV 296
>At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putative
/ CPA-FA synthase, putative similar to cyclopropane
synthase [Sterculia foetida] GI:21069167; contains Pfam
profiles PF02353: Cyclopropane-fatty-acyl-phospholipid
synthase, PF01593: amine oxidase, flavin-containing
Length = 867
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +2
Query: 101 YSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGD 250
YSD + DID + AW+++ T+K + + IL+++ +
Sbjct: 297 YSDIYLHHDIDLMPRNQAAWSAWNFLGSTEKKVCVTYWLNILQNLGENSE 346
>At3g23510.1 68416.m02960 cyclopropane fatty acid synthase, putative
/ CPA-FA synthase, putative similar to cyclopropane
synthase [Sterculia foetida] GI:21069167; contains Pfam
profile PF02353: Cyclopropane-fatty-acyl-phospholipid
synthase
Length = 867
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +2
Query: 101 YSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGD 250
YSD + DID + AW+++ T+K + + IL+++ +
Sbjct: 297 YSDIYLHHDIDLMPRNKAAWSAWNFLGSTEKKVCVTYWLNILQNLGENSE 346
>At2g29690.1 68415.m03609 anthranilate synthase, alpha subunit,
component I-2 (ASA2) identical to SP|P32069
Length = 621
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 197 IAILNVQEILKDMASQGDYEVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTL 355
++ +++ + D + V H R P PP + P+S P P TSL L
Sbjct: 1 MSAVSISAVKSDFFTVEAIAVTHHRTPHPPHFPSLRFPLSLKSP--PATSLNL 51
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 483 VSELTRVDXELIDKIQVLSHVSEEGTERLSEA-GEVSGPDAVCVRVN 346
+SE +DKI L+ S E RL+EA E++ A+C R++
Sbjct: 138 ISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARSQAMCSRLS 184
>At1g67310.1 68414.m07661 calmodulin-binding protein similar to
anther ethylene-upregulated calmodulin-binding protein
ER1 GI:11612392 from[Nicotiana tabacum]
Length = 1035
Score = 27.1 bits (57), Expect = 8.3
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +2
Query: 251 YEVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETS 385
Y+ H RW KPPE+ + +Q SLTLT TA TS
Sbjct: 61 YQEAHSRWLKPPEV---------LFILQNHESLTLTNTAPQRPTS 96
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 275 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPAS 394
P P LSP P P PL+SL+ + + S P +SP+S
Sbjct: 58 PPPLSLSPSSPPPPPPSS-SPLSSLSPSLSPSPPSSSPSS 96
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,066,046
Number of Sequences: 28952
Number of extensions: 243974
Number of successful extensions: 1005
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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