Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1244
(648 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39157| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_35552| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_39277| Best HMM Match : Gamma-BBH (HMM E-Value=0.02) 38 0.009
SB_28563| Best HMM Match : Gamma-BBH (HMM E-Value=0) 38 0.009
SB_10799| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_10794| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_57555| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_54675| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_49069| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_35551| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_31881| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_30009| Best HMM Match : RVT_1 (HMM E-Value=1.2e-18) 27 9.9
SB_29609| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_29264| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_25444| Best HMM Match : SH2 (HMM E-Value=6.4) 27 9.9
SB_7266| Best HMM Match : UPAR_LY6 (HMM E-Value=0.015) 27 9.9
SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_48398| Best HMM Match : BBE (HMM E-Value=4.1) 27 9.9
SB_44727| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_41687| Best HMM Match : SAP (HMM E-Value=3.3e-08) 27 9.9
SB_38084| Best HMM Match : IL15 (HMM E-Value=4.1) 27 9.9
SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 27 9.9
SB_25299| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23) 27 9.9
SB_12465| Best HMM Match : Ery_res_leader2 (HMM E-Value=2.7) 27 9.9
>SB_39157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +2
Query: 485 TKRGSYRNVCKALGG-IQHTIFGATWEFTT-VADHADTXYTNLPLAAHNDNIYWT 643
T+ + + K+LG ++ T FG W F+ V DHADT YT+ L AHNDN Y+T
Sbjct: 95 TELSAVEKLAKSLGCFVRETHFGRLWAFSNEVMDHADTAYTSGFLHAHNDNTYYT 149
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +3
Query: 258 WDDKHTTEFKADFLSQFDYKTWKNNRRLKPRLWRGCNVADRIAKVHVDEF-LDSDDSSK- 431
W D H T++K+ +L+Q Y K N++L+ + +RI + EF D+ ++K
Sbjct: 17 WSDGHATDYKSSWLAQHAY---KGNKKLRVKEELFLWDKERINSTTLPEFSFDAVTTNKK 73
Query: 432 ---EVFQSLLDYGVAFITGVQPSAEATETCAK 518
E+ ++++ YG AF+ A E AK
Sbjct: 74 DLFEISKAIIKYGFAFVNDTPTELSAVEKLAK 105
>SB_35552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 127 WLRDHCRCSQCYHANTFQRAKHILELPDSKILTLQFDKNSL 249
+LRDHC CS CYH + QR H+ L D K+L N +
Sbjct: 85 YLRDHCLCSTCYHPTSEQRLTHMKNL-DLKVLPSNVHVNDI 124
>SB_39277| Best HMM Match : Gamma-BBH (HMM E-Value=0.02)
Length = 210
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 115 FEDCWLRDHCRCSQCYHANTFQRAKHILEL 204
F +LRDHC C+ CYH + QR +I L
Sbjct: 63 FPYMYLRDHCACASCYHQTSQQRLNYITNL 92
>SB_28563| Best HMM Match : Gamma-BBH (HMM E-Value=0)
Length = 448
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 115 FEDCWLRDHCRCSQCYHANTFQRAKHILEL 204
F +LRDHC C+ CYH + QR +I L
Sbjct: 89 FPYMYLRDHCACASCYHQTSQQRLNYITNL 118
Score = 34.3 bits (75), Expect = 0.087
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 494 GSYRNVCKALGGIQHTIFGATWEFTTVADHADTXYTNLPLAAHNDNIYW 640
G + KA+G I+ T++G T + YTNL L H+D IY+
Sbjct: 218 GQLERIGKAVGFIRPTLYGVTVPLRLNPHATNLGYTNLGLRPHSDLIYY 266
>SB_10799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 79 VRVNFENGPSIPFEDCWLRDHCRCSQCYHANTFQR 183
+ V+++N + +LRD+C+C +CY++ QR
Sbjct: 49 LHVHWKNNQINRYPYVYLRDNCQCPKCYNSLLLQR 83
>SB_10794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 79 VRVNFENGPSIPFEDCWLRDHCRCSQCYHANTFQR 183
+ V+++N + +LRD+C+C +CY++ QR
Sbjct: 49 LHVHWKNNQINRYPYVYLRDNCQCPKCYNSLLLQR 83
>SB_57555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 509 RFCSF-RAWLHTSYKGNAIVKKRLKYFL*TVVRVKKLIN 396
R C + R HTSY+G+++ K+ K TVV KL N
Sbjct: 279 RECRYLRVGNHTSYRGDSVNTKQCKCIACTVVDKTKLRN 317
>SB_54675| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 505 KRVQSFRRNSTHYFWCYVGI 564
+R+ RN HYFW Y GI
Sbjct: 30 QRLCGVERNCAHYFWFYSGI 49
>SB_49069| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 124 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK 216
C++RD +CS ++ NT A H L LP ++
Sbjct: 75 CYIRDMFVKCSDVHNKNTKNAANHNLVLPKAR 106
>SB_35551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 124 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK 216
C++RD +CS ++ NT A H L LP ++
Sbjct: 301 CYIRDMFVKCSNVHNKNTKNAANHNLVLPKAR 332
>SB_31881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 124 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK 216
C++RD +CS ++ NT A H L LP ++
Sbjct: 75 CYIRDMFVKCSDVHNKNTKNAANHNLVLPKAR 106
>SB_30009| Best HMM Match : RVT_1 (HMM E-Value=1.2e-18)
Length = 552
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 124 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK 216
C++RD +CS ++ NT A H L LP ++
Sbjct: 506 CYIRDMFVKCSDVHNKNTKNAANHNLVLPKAR 537
>SB_29609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 124 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK 216
C++RD +CS ++ NT A H L LP ++
Sbjct: 159 CYIRDMFVKCSDVHNKNTKNAANHNLVLPKAR 190
>SB_29264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 124 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK 216
C++RD +CS ++ NT A H L LP ++
Sbjct: 55 CYIRDMFVKCSDVHNKNTKNAANHNLVLPKAR 86
>SB_25444| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 252
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 124 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK 216
C++RD +CS ++ NT A H L LP ++
Sbjct: 206 CYIRDMFVKCSDVHNKNTKNAANHNLVLPKAR 237
>SB_7266| Best HMM Match : UPAR_LY6 (HMM E-Value=0.015)
Length = 513
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 307 NCDRKSALNSVVCLSSHSLLDCSYRI 230
NC SA N +VCL S L+CS ++
Sbjct: 144 NCQPLSA-NDIVCLDSTGFLECSMKL 168
>SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +3
Query: 408 LDSDDSSKEVFQSLLDYGVAFITGVQPSAEATETCAKL*EEFNTLFL 548
++ D SS++ +Q+L D + G+Q S +A E AKL +++ + +
Sbjct: 765 IEQDPSSEKSYQALRDTTHYLLHGLQYSNQAKEEQAKLIPKYHEIMI 811
>SB_48398| Best HMM Match : BBE (HMM E-Value=4.1)
Length = 243
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 451 LTMALPL*LVCNQARKLQKRVQSFRRNSTHY 543
LT LP L+ N+ +L +R + FRR+ +HY
Sbjct: 86 LTDHLPNFLIINKFTELPRRFKLFRRDYSHY 116
>SB_44727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 124 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK 216
C++RD +CS ++ NT A H L LP ++
Sbjct: 55 CYIRDMFVKCSDVHNKNTKNAANHNLVLPKAR 86
>SB_41687| Best HMM Match : SAP (HMM E-Value=3.3e-08)
Length = 606
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2
Query: 344 LQSAIVFPSFIIELRQKVRFEFCSVLIVPFIVRLFLSNCNVSIFES 207
L S++VFP+ + K E C + +VP RL L V I +S
Sbjct: 366 LLSSLVFPTIATKALPKAGGEICLLQLVPKPYRLQLKTSRVGIQKS 411
>SB_38084| Best HMM Match : IL15 (HMM E-Value=4.1)
Length = 164
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 124 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK 216
C++RD +CS ++ NT A H L LP ++
Sbjct: 55 CYIRDMFVKCSDVHNKNTKNAANHNLVLPKAR 86
>SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +1
Query: 46 KIENVIFVERTVRVNFENGPSIPFEDCWLRDHCRCSQCYHANT 174
KI N +FV R V V ENG +D DHC C C+ +
Sbjct: 96 KINNSLFVCRQVVVKCENGVC---QD----DHCACLPCWRGKS 131
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 387 KVHVDEFLDSDDSSKEVFQSLLDYGVAFITGVQP 488
+ HVD L D S V+Q +LD G + ++P
Sbjct: 65 RAHVDATLRGQDISAGVYQEILDLGGTGVIALKP 98
>SB_25299| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23)
Length = 407
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 124 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK 216
C++RD +CS ++ NT A H L LP ++
Sbjct: 366 CYIRDMFVKCSDVHNKNTKNAANHNLVLPKAR 397
>SB_12465| Best HMM Match : Ery_res_leader2 (HMM E-Value=2.7)
Length = 712
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 168 EYVPES*THFRTARFEDTYITIR*EQSNN--EWDDKHTTEFKADFLSQFDYKTWKNN 332
EY+ + F + Y+ +R + N +WD + KA + Q +YK W+ +
Sbjct: 196 EYLQRTSNDFIRESRQRQYLGVRYDARQNVYDWDITMKLQKKASIVHQHEYKEWREH 252
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,286,481
Number of Sequences: 59808
Number of extensions: 376396
Number of successful extensions: 1020
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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