Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1243
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41510| Best HMM Match : Minor_tail_Z (HMM E-Value=3.5) 36 0.042
SB_47515| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 34 0.096
SB_17452| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 34 0.096
SB_54554| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 33 0.29
SB_52808| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 33 0.29
SB_40055| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 33 0.29
SB_20592| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_14108| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 33 0.29
SB_5126| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_3604| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_2129| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_54746| Best HMM Match : RVT_1 (HMM E-Value=8.4e-11) 33 0.29
SB_36062| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 33 0.29
SB_32612| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 33 0.29
SB_5327| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 33 0.29
SB_36229| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 32 0.39
SB_9519| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 31 0.68
SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_36653| Best HMM Match : ACBP (HMM E-Value=3.6) 28 8.4
SB_25596| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_41510| Best HMM Match : Minor_tail_Z (HMM E-Value=3.5)
Length = 208
Score = 35.5 bits (78), Expect = 0.042
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIGXAKKSNGCIIIHVKKFSKS 612
+ K +T W A HV +D K + GEL GS K G K+ CI H+K F+
Sbjct: 141 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKDFNID 197
Query: 613 VNH 621
V H
Sbjct: 198 VQH 200
>SB_47515| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 189
Score = 34.3 bits (75), Expect = 0.096
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = +1
Query: 325 DSQPQEKVCSTTKDVFW-DR-SKIRLLLKLCLEDRFKNINKQKTLWHDIASHVGTTADEC 498
DS E ++ W DR + +L + L + K +T W A HV +D
Sbjct: 15 DSSFMEDAILNILNIRWQDRITNTEVLERANLPSVITTMRKAQTRW---AGHVCRMSDSR 71
Query: 499 CKKSEI*GELILGS*KRIGXAKKSNGCIIIHVKKFSKSVN 618
K + GEL GS K G K+ CI H+K F+ V+
Sbjct: 72 IPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKDFNIDVS 111
>SB_17452| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 189
Score = 34.3 bits (75), Expect = 0.096
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = +1
Query: 325 DSQPQEKVCSTTKDVFW-DR-SKIRLLLKLCLEDRFKNINKQKTLWHDIASHVGTTADEC 498
DS E ++ W DR + +L + L + K +T W A HV +D
Sbjct: 15 DSSFMEDAILNILNIRWQDRITNTEVLERANLPSVITTMRKAQTRW---AGHVCRMSDSR 71
Query: 499 CKKSEI*GELILGS*KRIGXAKKSNGCIIIHVKKFSKSVN 618
K + GEL GS K G K+ CI H+K F+ V+
Sbjct: 72 IPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKDFNIDVS 111
>SB_54554| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 137
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIGXAKKSNGCIIIHVKKFSKS 612
+ K +T W A HV +D K + GEL GS K G K+ CI H+K F+
Sbjct: 1 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKDFNID 57
Query: 613 VN 618
V+
Sbjct: 58 VS 59
>SB_52808| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 166
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIGXAKKSNGCIIIHVKKFSKS 612
+ K +T W A HV +D K + GEL GS K G K+ CI H+K F+
Sbjct: 30 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKDFNID 86
Query: 613 VN 618
V+
Sbjct: 87 VS 88
>SB_40055| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 303
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIGXAKKSNGCIIIHVKKFSKS 612
+ K +T W A HV +D K + GEL GS K G K+ CI H+K F+
Sbjct: 167 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKDFNID 223
Query: 613 VN 618
V+
Sbjct: 224 VS 225
>SB_20592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIGXAKKSNGCIIIHVKKFSKS 612
+ K +T W A HV +D K + GEL GS K G K+ CI H+K F+
Sbjct: 1 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKDFNID 57
Query: 613 VN 618
V+
Sbjct: 58 VS 59
>SB_14108| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 404
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIGXAKKSNGCIIIHVKKFSKS 612
+ K +T W A HV +D K + GEL GS K G K+ CI H+K F+
Sbjct: 268 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKDFNID 324
Query: 613 VN 618
V+
Sbjct: 325 VS 326
>SB_5126| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIGXAKKSNGCIIIHVKKFSKS 612
+ K +T W A HV +D K + GEL GS K G K+ CI H+K F+
Sbjct: 222 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKDFNID 278
Query: 613 VN 618
V+
Sbjct: 279 VS 280
>SB_3604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1319
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIGXAKKSNGCIIIHVKKFSKS 612
+ K +T W A HV +D K + GEL GS K G K+ CI H+K F+
Sbjct: 1183 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKDFNID 1239
Query: 613 VN 618
V+
Sbjct: 1240 VS 1241
>SB_2129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIGXAKKSNGCIIIHVKKFSKS 612
+ K +T W A HV +D K + GEL GS K G K+ CI H+K F+
Sbjct: 30 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKDFNID 86
Query: 613 VN 618
V+
Sbjct: 87 VS 88
>SB_54746| Best HMM Match : RVT_1 (HMM E-Value=8.4e-11)
Length = 959
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIGXAKKSNGCIIIHVKKFSKS 612
+ K +T W A HV +D K + GEL GS K G K+ CI H+K F+
Sbjct: 887 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKDFNID 943
Query: 613 VN 618
V+
Sbjct: 944 VS 945
>SB_36062| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 166
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIGXAKKSNGCIIIHVKKFSKS 612
+ K +T W A HV +D K + GEL GS K G K+ CI H+K F+
Sbjct: 30 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKDFNID 86
Query: 613 VN 618
V+
Sbjct: 87 VS 88
>SB_32612| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 166
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIGXAKKSNGCIIIHVKKFSKS 612
+ K +T W A HV +D K + GEL GS K G K+ CI H+K F+
Sbjct: 30 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKDFNID 86
Query: 613 VN 618
V+
Sbjct: 87 VS 88
>SB_5327| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 328
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIGXAKKSNGCIIIHVKKFSKS 612
+ K +T W A HV +D K + GEL GS K G K+ CI H+K F+
Sbjct: 192 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKDFNID 248
Query: 613 VN 618
V+
Sbjct: 249 VS 250
>SB_36229| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 269
Score = 32.3 bits (70), Expect = 0.39
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIGXAKKSNGCIIIHVKKFSKS 612
+ K +T W A HV +D K + GEL GS K G K+ CI H+K F+
Sbjct: 133 MRKVQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKDFNID 189
Query: 613 VN 618
V+
Sbjct: 190 VS 191
>SB_9519| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 299
Score = 31.5 bits (68), Expect = 0.68
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = +1
Query: 433 INKQKTLWHDIASHVGTTADECCKKSEI*GELILGS*KRIGXAKKSNGCIIIHVKKF 603
+ K +T W A HV +D K + GEL GS K G K+ CI H+K F
Sbjct: 163 MRKAQTRW---AGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKDCIKSHLKDF 216
>SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2346
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 262 ETGENRQFIHINEPPIIVQEHDSQPQE 342
E GE Q HIN I+V E PQE
Sbjct: 1139 EVGEELQIFHINPGSIVVTELPPSPQE 1165
>SB_36653| Best HMM Match : ACBP (HMM E-Value=3.6)
Length = 206
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 424 FKNINKQKTLWHDIASHVGTTADECCKK 507
FK+ NK++ W +A G + DE +K
Sbjct: 39 FKDKNKKENAWKQVAEQAGCSVDEAKRK 66
>SB_25596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 424 FKNINKQKTLWHDIASHVGTTADECCKK 507
FK+ NK++ W +A G + DE +K
Sbjct: 39 FKDKNKKENAWKQVAEQAGCSVDEAKRK 66
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,570,021
Number of Sequences: 59808
Number of extensions: 376739
Number of successful extensions: 995
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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