Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1242
(399 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 138 1e-33
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 128 2e-30
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 125 1e-29
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 125 1e-29
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 120 3e-28
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 119 7e-28
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 97 4e-21
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 97 4e-21
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 62 1e-10
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 61 3e-10
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 60 8e-10
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 60 8e-10
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 58 2e-09
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 58 3e-09
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 58 3e-09
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 55 2e-08
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 55 2e-08
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 55 2e-08
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 55 2e-08
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 55 2e-08
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 53 7e-08
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 51 3e-07
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 51 4e-07
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 51 4e-07
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 48 2e-06
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 40 9e-04
Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical pr... 26 8.7
AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical ... 26 8.7
AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical ... 26 8.7
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 138 bits (335), Expect = 1e-33
Identities = 62/70 (88%), Positives = 64/70 (91%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 247 PRASXXTWSP 276
PRA P
Sbjct: 61 PRACLVDLEP 70
Score = 53.6 bits (123), Expect = 5e-08
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 320 RPDNFVFGQXGXGXNWAKGHYSEGA 394
RPDNFVFGQ G G NWAKGHY+EGA
Sbjct: 86 RPDNFVFGQSGAGNNWAKGHYTEGA 110
Score = 41.9 bits (94), Expect = 2e-04
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +3
Query: 258 LXDLEPGTMDSXRSGPFGQIF 320
L DLEPGTMDS R+GPFGQ+F
Sbjct: 65 LVDLEPGTMDSVRAGPFGQLF 85
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 128 bits (308), Expect = 2e-30
Identities = 55/63 (87%), Positives = 59/63 (93%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 53.6 bits (123), Expect = 5e-08
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 320 RPDNFVFGQXGXGXNWAKGHYSEGA 394
RPDNFVFGQ G G NWAKGHY+EGA
Sbjct: 86 RPDNFVFGQSGAGNNWAKGHYTEGA 110
Score = 44.8 bits (101), Expect = 2e-05
Identities = 20/25 (80%), Positives = 22/25 (88%), Gaps = 1/25 (4%)
Frame = +3
Query: 249 PR-ILXDLEPGTMDSXRSGPFGQIF 320
PR +L DLEPGTMDS RSGPFGQ+F
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLF 85
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 125 bits (302), Expect = 1e-29
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 52.4 bits (120), Expect = 1e-07
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +2
Query: 320 RPDNFVFGQXGXGXNWAKGHYSEGA 394
RPDN+VFGQ G G NWAKGHY+EGA
Sbjct: 86 RPDNYVFGQSGAGNNWAKGHYTEGA 110
Score = 44.8 bits (101), Expect = 2e-05
Identities = 20/25 (80%), Positives = 22/25 (88%), Gaps = 1/25 (4%)
Frame = +3
Query: 249 PR-ILXDLEPGTMDSXRSGPFGQIF 320
PR +L DLEPGTMDS RSGPFGQ+F
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLF 85
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 125 bits (302), Expect = 1e-29
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 52.4 bits (120), Expect = 1e-07
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +2
Query: 320 RPDNFVFGQXGXGXNWAKGHYSEGA 394
RPDN+VFGQ G G NWAKGHY+EGA
Sbjct: 86 RPDNYVFGQSGAGNNWAKGHYTEGA 110
Score = 44.8 bits (101), Expect = 2e-05
Identities = 20/25 (80%), Positives = 22/25 (88%), Gaps = 1/25 (4%)
Frame = +3
Query: 249 PR-ILXDLEPGTMDSXRSGPFGQIF 320
PR +L DLEPGTMDS RSGPFGQ+F
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLF 85
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 120 bits (290), Expect = 3e-28
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 53.6 bits (123), Expect = 5e-08
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 320 RPDNFVFGQXGXGXNWAKGHYSEGA 394
RPDNFVFGQ G G NWAKGHY+EGA
Sbjct: 86 RPDNFVFGQSGAGNNWAKGHYTEGA 110
Score = 44.8 bits (101), Expect = 2e-05
Identities = 20/25 (80%), Positives = 22/25 (88%), Gaps = 1/25 (4%)
Frame = +3
Query: 249 PR-ILXDLEPGTMDSXRSGPFGQIF 320
PR +L DLEPGTMDS RSGPFGQ+F
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLF 85
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 119 bits (287), Expect = 7e-28
Identities = 50/63 (79%), Positives = 58/63 (92%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 53.6 bits (123), Expect = 5e-08
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 320 RPDNFVFGQXGXGXNWAKGHYSEGA 394
RPDNFVFGQ G G NWAKGHY+EGA
Sbjct: 86 RPDNFVFGQSGAGNNWAKGHYTEGA 110
Score = 44.8 bits (101), Expect = 2e-05
Identities = 20/25 (80%), Positives = 22/25 (88%), Gaps = 1/25 (4%)
Frame = +3
Query: 249 PR-ILXDLEPGTMDSXRSGPFGQIF 320
PR +L DLEPGTMDS RSGPFGQ+F
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLF 85
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 97.1 bits (231), Expect = 4e-21
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 35.9 bits (79), Expect = 0.011
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 323 PDNFVFGQXGXGXNWAKGHYSEGA 394
P+N V G+ G G NW++G+Y +GA
Sbjct: 87 PENAVSGESGAGNNWSRGYYEQGA 110
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 97.1 bits (231), Expect = 4e-21
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 35.9 bits (79), Expect = 0.011
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 323 PDNFVFGQXGXGXNWAKGHYSEGA 394
P+N V G+ G G NW++G+Y +GA
Sbjct: 87 PENAVSGESGAGNNWSRGYYEQGA 110
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 62.1 bits (144), Expect = 1e-10
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 240
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 241 YVPR 252
+VPR
Sbjct: 67 HVPR 70
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 60.9 bits (141), Expect = 3e-10
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 61 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 234
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L + + N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 235 GKYVPRASXXTWSPAP 282
GK+VPRA P P
Sbjct: 64 GKHVPRAIMVDLEPTP 79
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 302 TFRTDLRPDNFVFGQXGXGXNWAKGHYSEG 391
T++T P+ + G+ N+A+GHY+ G
Sbjct: 87 TYKTLFHPEQLLTGKEDAANNYARGHYTIG 116
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 59.7 bits (138), Expect = 8e-10
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 247 PRA 255
PR+
Sbjct: 61 PRS 63
Score = 27.5 bits (58), Expect = 3.7
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +2
Query: 302 TFRTDLRPDNFVFGQXGXGXNWAKGHYSEG 391
T++ P+ + G+ N+A+GHY+ G
Sbjct: 80 TYKKLFHPEQMITGKEDAANNYARGHYTVG 109
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 59.7 bits (138), Expect = 8e-10
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 247 PRA 255
PR+
Sbjct: 61 PRS 63
Score = 27.5 bits (58), Expect = 3.7
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +2
Query: 302 TFRTDLRPDNFVFGQXGXGXNWAKGHYSEG 391
T++ P+ + G+ N+A+GHY+ G
Sbjct: 80 TYKKLFHPEQMITGKEDAANNYARGHYTVG 109
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 58.4 bits (135), Expect = 2e-09
Identities = 30/65 (46%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 240
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 57.6 bits (133), Expect = 3e-09
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 247 PRA 255
PR+
Sbjct: 61 PRS 63
Score = 27.5 bits (58), Expect = 3.7
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +2
Query: 302 TFRTDLRPDNFVFGQXGXGXNWAKGHYSEG 391
T++ P+ + G+ N+A+GHY+ G
Sbjct: 80 TYKKLFHPEQMITGKEDAANNYARGHYTVG 109
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 57.6 bits (133), Expect = 3e-09
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 247 PRA 255
PR+
Sbjct: 61 PRS 63
Score = 27.5 bits (58), Expect = 3.7
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +2
Query: 302 TFRTDLRPDNFVFGQXGXGXNWAKGHYSEG 391
T++ P+ + G+ N+A+GHY+ G
Sbjct: 80 TYKKLFHPEQMITGKEDAANNYARGHYTVG 109
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 55.2 bits (127), Expect = 2e-08
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 247 PRA 255
PR+
Sbjct: 61 PRS 63
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 55.2 bits (127), Expect = 2e-08
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
Score = 29.1 bits (62), Expect = 1.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 302 TFRTDLRPDNFVFGQXGXGXNWAKGHYSEG 391
T+R+ P+ + G+ N+A+GHY+ G
Sbjct: 82 TYRSLFHPEQLITGKEDAANNYARGHYTIG 111
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 55.2 bits (127), Expect = 2e-08
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 247 PRA 255
PR+
Sbjct: 61 PRS 63
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 55.2 bits (127), Expect = 2e-08
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
Score = 29.1 bits (62), Expect = 1.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 302 TFRTDLRPDNFVFGQXGXGXNWAKGHYSEG 391
T+R+ P+ + G+ N+A+GHY+ G
Sbjct: 82 TYRSLFHPEQLITGKEDAANNYARGHYTIG 111
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 55.2 bits (127), Expect = 2e-08
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
Score = 29.1 bits (62), Expect = 1.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 302 TFRTDLRPDNFVFGQXGXGXNWAKGHYSEG 391
T+R+ P+ + G+ N+A+GHY+ G
Sbjct: 82 TYRSLFHPEQLITGKEDAANNYARGHYTIG 111
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 53.2 bits (122), Expect = 7e-08
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 244 VPRA 255
VPRA
Sbjct: 61 VPRA 64
Score = 29.1 bits (62), Expect = 1.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 302 TFRTDLRPDNFVFGQXGXGXNWAKGHYSEG 391
T+R+ P+ + G+ N+A+GHY+ G
Sbjct: 81 TYRSLFHPEQLITGKEDAANNYARGHYTIG 110
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 51.2 bits (117), Expect = 3e-07
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG-AYHGDSDLQLERINVYYNEASGGKYV 246
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 247 PRA 255
PRA
Sbjct: 66 PRA 68
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 249 PR-ILXDLEPGTMDSXRSGPFGQIF 320
PR I DLEP +D R+G +G +F
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLF 90
Score = 26.2 bits (55), Expect = 8.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 323 PDNFVFGQXGXGXNWAKGHYSEG 391
PD + G+ N+A+GHY+ G
Sbjct: 92 PDQIINGKEDAANNYARGHYTIG 114
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 50.8 bits (116), Expect = 4e-07
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = +1
Query: 76 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 255
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 50.8 bits (116), Expect = 4e-07
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = +1
Query: 76 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 255
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 48.0 bits (109), Expect = 2e-06
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 247 PRA 255
PR+
Sbjct: 60 PRS 62
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 39.5 bits (88), Expect = 9e-04
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +1
Query: 145 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPR 252
EHGI P G YH + D + E IN ++ E +GGK+VPR
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPR 42
>Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 26.2 bits (55), Expect = 8.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 159 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 58
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
>Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 26.2 bits (55), Expect = 8.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 159 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 58
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
>AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 26.2 bits (55), Expect = 8.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 159 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 58
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
>AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 26.2 bits (55), Expect = 8.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 159 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 58
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,156,586
Number of Sequences: 27780
Number of extensions: 144469
Number of successful extensions: 424
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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