Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1241
(399 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 122 8e-29
07_01_0578 + 4295386-4296489,4297394-4297507 121 2e-28
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 33 0.063
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 33 0.083
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 32 0.15
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 30 0.77
10_08_0166 + 15363630-15365633,15366959-15367496,15367577-15367878 29 1.0
08_02_0105 + 12448808-12449152,12449218-12449409,12449520-124496... 29 1.0
08_01_0490 + 4284192-4284740 29 1.0
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 29 1.0
10_07_0029 + 12031711-12032464,12044289-12044386 29 1.4
07_01_0469 - 3552409-3553368 29 1.8
04_01_0244 - 3194141-3195091,3195301-3195312 29 1.8
02_03_0163 + 15859293-15860333 29 1.8
02_02_0522 - 11161385-11161537,11162513-11162668,11164176-111642... 29 1.8
10_01_0359 + 3956527-3956616,3957623-3957818,3958102-3959418,395... 28 3.1
04_03_0331 + 14510848-14511124,14511139-14511528,14511708-145119... 28 3.1
03_01_0147 - 1170481-1171260,1171332-1171511 28 3.1
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 27 4.1
05_06_0214 - 26425100-26425922,26426008-26426058,26426183-264262... 27 4.1
10_01_0121 - 1493822-1494316 27 5.5
09_06_0153 - 21243108-21245660 27 5.5
08_02_1017 - 23616244-23616381,23616471-23616537,23617160-236172... 27 5.5
11_06_0195 - 21138029-21138389,21139796-21140052 27 7.2
11_01_0074 + 582210-582434,582521-582712,582785-582950,584013-58... 27 7.2
11_06_0209 + 21282079-21282369,21287029-21287137,21287462-212875... 26 9.5
09_02_0384 - 8294914-8297817 26 9.5
07_01_0547 + 4052618-4052659,4055575-4055741,4055839-4056556,405... 26 9.5
06_03_0807 - 24789843-24789859,24791536-24791613,24793589-24793709 26 9.5
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 26 9.5
03_02_1040 + 13601779-13602390 26 9.5
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 26 9.5
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 122 bits (295), Expect = 8e-29
Identities = 62/109 (56%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Frame = +3
Query: 75 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRXPXXVSKEAG 251
+ ARPLVSV + E A +P V +APIRPD+V H +S N R P VS+ AG
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62
Query: 252 HKPVPNHGVPGRAVXRIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTXPW 398
H+ GRAV RIPRV GGGTHR+GQGAFGNMCRGGRMFAPT W
Sbjct: 63 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIW 111
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 121 bits (292), Expect = 2e-28
Identities = 61/107 (57%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
Frame = +3
Query: 84 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRXPXXVSKEAGHK 257
RPLVSV + + + T ++ L VF+AP+RPD+V VH +S N R P VS+ AGH+
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65
Query: 258 PVPNHGVPGRAVXRIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTXPW 398
GRAV RIPRV GGGTHR+GQGAFGNMCRGGRMFAPT W
Sbjct: 66 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTW 112
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 33.5 bits (73), Expect = 0.063
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 370 PPRHMLPKAP*PDLWVPPP 314
PPRH++P+ P P WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 33.1 bits (72), Expect = 0.083
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +2
Query: 47 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 202
ASL N + P+F V G SQA V + GAHT G Q C F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 32.3 bits (70), Expect = 0.15
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 47 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 202
ASL N I +PTF +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>11_01_0072 +
570345-570476,570640-570831,571095-571260,571487-571872
Length = 291
Score = 29.9 bits (64), Expect = 0.77
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 47 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 202
ASL N I +PT +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>10_08_0166 + 15363630-15365633,15366959-15367496,15367577-15367878
Length = 947
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 258 PVPNHGVPGRAVXRIPRVRGGGTHRSGQGAFG 353
P P+ GVP +PR GGG+ R G GA G
Sbjct: 785 PPPHIGVPPPQGGFLPRQIGGGSGRPGFGAHG 816
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 273 GVPGRAVXRIP-RVRGGGTHRSGQGAFGNMCRGG 371
G PG V R R +GGG+ SG GA G GG
Sbjct: 907 GWPGYGVQRPGFRTQGGGSGLSGSGAQGGPSMGG 940
>08_02_0105 +
12448808-12449152,12449218-12449409,12449520-12449685,
12449771-12450201
Length = 377
Score = 29.5 bits (63), Expect = 1.0
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 47 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 202
ASL+ N ++ +PT V ++ G S V + GAHT G + C+ F
Sbjct: 197 ASLQGANTNLPAPTSGVATLVQKFRNVGLSAKDMVALSGAHTIGKAR-CTTF 247
>08_01_0490 + 4284192-4284740
Length = 182
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/57 (31%), Positives = 22/57 (38%)
Frame = +3
Query: 225 PXXVSKEAGHKPVPNHGVPGRAVXRIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTXP 395
P + AG P +G AV R P GG R G+G G + AP P
Sbjct: 99 PPVILAAAGTTPERGNGSKTNAVLRRPTPPGGAGPREGRGGRGGVIHAVADSAPQRP 155
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +3
Query: 105 SEKSETVQGAAKPLPFVFKAP--IRPDLVNDVHVSMSKNSRXPXXVSKEAGHKPVPNHGV 278
S ++ KP+P + P + P V SK + P + K A +KP+ + V
Sbjct: 201 STAKPSMPAPTKPVPPLLTKPSVVAPPPRRPVKADTSKEKKGPILIDKFASNKPIVDPVV 260
Query: 279 PGRAVXRIPRVRG 317
+ + VRG
Sbjct: 261 AAALIEPVKPVRG 273
>10_07_0029 + 12031711-12032464,12044289-12044386
Length = 283
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 399 ARXSWGRTYVHHDTCYRRHPDRTYG 325
AR Y+ HDT YR HP R G
Sbjct: 86 ARLRERHNYIFHDTAYRYHPRRANG 110
>07_01_0469 - 3552409-3553368
Length = 319
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 399 ARXSWGRTYVHHDTCYRRHPDRTYG 325
AR Y+ HDT YR HP R G
Sbjct: 86 ARLRERHNYIFHDTAYRFHPRRASG 110
>04_01_0244 - 3194141-3195091,3195301-3195312
Length = 320
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 399 ARXSWGRTYVHHDTCYRRHPDRTYG 325
AR Y+ HDT YR HP R G
Sbjct: 90 ARLRERHNYIFHDTAYRFHPRRANG 114
>02_03_0163 + 15859293-15860333
Length = 346
Score = 28.7 bits (61), Expect = 1.8
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 132 AAKPLPFVFKAPIRPDLVNDVHVSMSKNSRXPXXVSKEAGHKPVPNHGVPGRAVXRIPRV 311
A +PLPFVF A + LV+ + ++ P + A K V + + A+ I RV
Sbjct: 85 ALRPLPFVFTAALPVKLVDAAAAAAGASASRPPPAAPAATFKFVVSSAIKVGAMAAIVRV 144
>02_02_0522 -
11161385-11161537,11162513-11162668,11164176-11164298,
11164404-11164466,11164512-11164577,11165128-11165232,
11165336-11165435,11165520-11165590,11166037-11166093,
11167215-11167292,11167367-11167441,11168490-11168540,
11169015-11169094,11169560-11169660,11169749-11169810,
11170084-11170590
Length = 615
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 225 PXXVSKEAGHKPVPNHGVPGRAVXRIP--RVRGGGTHRSGQGAFGNMCRGG 371
P + ++ G P P G G V RI RV GG G G+ GN GG
Sbjct: 85 PPEIWRQPGEAP-PGGGARGAEVGRIDVVRVAAGGGGGGGDGSDGNEGGGG 134
>10_01_0359 +
3956527-3956616,3957623-3957818,3958102-3959418,
3959482-3960445,3960588-3960648,3961500-3961946
Length = 1024
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 390 SWGRTYVHHDTCYRRHPDRTYGYHH 316
SWGR H D RR P R+ +HH
Sbjct: 303 SWGRD--HADNRLRRSPSRSSNFHH 325
>04_03_0331 +
14510848-14511124,14511139-14511528,14511708-14511997,
14512080-14512154,14512194-14512409,14512727-14512795,
14512941-14513891
Length = 755
Score = 27.9 bits (59), Expect = 3.1
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 249 GHKPVPNHGVPGRAVXRIPRVRGGGTHRSGQGAFGN-MCRGGRMFA 383
G + P GVP R V R +RG S QGA G+ RGGRM A
Sbjct: 133 GSQCPPGVGVPPRTVHRTLGLRG---RPSAQGASGSGPRRGGRMSA 175
>03_01_0147 - 1170481-1171260,1171332-1171511
Length = 319
Score = 27.9 bits (59), Expect = 3.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 41 GIASLK*R-NESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 202
G ASL+ ++I +PTF++ + G +Q V + GAHT G C+ F
Sbjct: 139 GTASLEPEVADNIPAPTFTLDQLTQSFAAKGLTQEEMVTLSGAHTVGRAH-CTSF 192
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -1
Query: 351 RRHPDRTYGYHHHGHAEFGQQHVRVP 274
R H D +G+HHH H G H P
Sbjct: 68 RAHGDHHHGHHHHHHGH-GHSHHHGP 92
>05_06_0214 -
26425100-26425922,26426008-26426058,26426183-26426256,
26426344-26426441,26426547-26426671,26426724-26426957,
26426992-26427037,26427101-26427152,26427331-26427367,
26427521-26427637,26428287-26428352,26428439-26428518,
26429102-26429311,26429650-26429739,26430093-26430182,
26430280-26430411,26430876-26431094,26431203-26431286,
26431543-26431656,26431857-26431914,26432535-26432602,
26432847-26432962,26433495-26433574,26433839-26433912
Length = 1045
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 156 IRTGGAWLHPAPSHSSLN-TPTLKVGLPIDSF 64
+R+ WL P P+H ++N L + +P+D F
Sbjct: 865 LRSYITWLKPTPAHVAMNPAEALAMQIPVDHF 896
>10_01_0121 - 1493822-1494316
Length = 164
Score = 27.1 bits (57), Expect = 5.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 272 WGTRTCCXPNSACPWW 319
WG R C PN+ WW
Sbjct: 88 WGHRLCPAPNTKIQWW 103
>09_06_0153 - 21243108-21245660
Length = 850
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 133 APCTVSLFSEYTDTKGRATDRLISLL*RSYTSEIYTNSGDK 11
APCTV +F++ +G A+ RL + + S + N GD+
Sbjct: 612 APCTVGVFADRPFWRGGASFRLPTKISTSEETTAARNQGDQ 652
>08_02_1017 -
23616244-23616381,23616471-23616537,23617160-23617238,
23617330-23617486,23617581-23617719,23617820-23617872,
23618037-23618120,23618291-23618359,23618488-23618553,
23618657-23618800,23619331-23619414,23619498-23619596,
23620097-23620219,23620745-23621290
Length = 615
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +3
Query: 171 RPDLVNDVHVSMSKNSRXPXXV--SKEAGHKPVPNHGVPGRAVXRI 302
RP + DV S S +S P SK++GH V HG + R+
Sbjct: 38 RPSSITDVSRSCSSSSSSPPRSLSSKQSGHADVLAHGAVDKDPIRL 83
>11_06_0195 - 21138029-21138389,21139796-21140052
Length = 205
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/18 (61%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
Frame = -1
Query: 330 YGYHHHGHAE-FGQQHVR 280
+G HHHGH F QQH R
Sbjct: 26 FGEHHHGHYNYFHQQHHR 43
>11_01_0074 +
582210-582434,582521-582712,582785-582950,584013-584404
Length = 324
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 47 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 202
ASL N +I PT + G SQ V + G+HT G + C+ F
Sbjct: 157 ASLSGANNNIPPPTSGLANLTSLFAAQGLSQKDMVALSGSHTIGQAR-CTNF 207
>11_06_0209 +
21282079-21282369,21287029-21287137,21287462-21287580,
21287722-21287829,21287943-21288062,21288838-21289011,
21289111-21289212
Length = 340
Score = 26.2 bits (55), Expect = 9.5
Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +3
Query: 153 VFKAPIRPDLVNDVHVSMSKNSRXPXXVSKEAGHKPVPNHGVPGRA---VXRIPRVRGGG 323
VF PIR D+V+ V +K VS G KP G GRA R P+ RGG
Sbjct: 160 VFDVPIRKDIVHRVGTHSTKTI---SEVS-GTGRKPYNQKGT-GRARHGTLRGPQFRGGA 214
Query: 324 T 326
T
Sbjct: 215 T 215
>09_02_0384 - 8294914-8297817
Length = 967
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 90 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSK 212
LV +Y S V PLP + + PIR LV +H+++ K
Sbjct: 116 LVDLYDRGSFEVVSVDGPLPSIEEKPIREKLVG-MHLNVMK 155
>07_01_0547 +
4052618-4052659,4055575-4055741,4055839-4056556,
4056678-4057114,4057241-4057315,4057490-4057673,
4057759-4057854,4057952-4058018,4058556-4058715,
4058808-4059199,4059254-4059300
Length = 794
Score = 26.2 bits (55), Expect = 9.5
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 204 MSKNSRXPXXVSKEAGHKPVPNHGVPGRAVXRIPRV-RGGGTH 329
+ K S VS G PV NH PG+ PRV RG G H
Sbjct: 335 VQKESVMDLSVSTCKGKSPVQNHSNPGKTPS--PRVLRGIGLH 375
>06_03_0807 - 24789843-24789859,24791536-24791613,24793589-24793709
Length = 71
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 220 LEFLDIET*TSLTRSGRMGALNTNGRGLAAPCTVSLFSE 104
LE L E S+ R GR+ + G+G PC+ ++ E
Sbjct: 28 LEALQEEESVSVQRRGRVENSSREGKGRVMPCSAYVWGE 66
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -1
Query: 396 RXSWGRTYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRVPH 271
R GR + HH RH +HHH H G H R H
Sbjct: 529 RHQKGRHHRHHHDHRHRHGHSHGDHHHHYH---GGHHQRRRH 567
>03_02_1040 + 13601779-13602390
Length = 203
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 348 RHPDRTYGYHHHGHAEFGQ 292
RH R+ YHHH H GQ
Sbjct: 17 RHLSRSLTYHHHHHPYQGQ 35
>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
Length = 248
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -1
Query: 333 TYGYHH-HGHAEFGQQHVRVPHDSA 262
T+ +HH HGH FG+ H H A
Sbjct: 144 THDHHHGHGHHLFGRDHWPASHHPA 168
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,365,564
Number of Sequences: 37544
Number of extensions: 251266
Number of successful extensions: 910
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 682720236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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