Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1238
         (618 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023709-1|AAY85109.1|  138|Drosophila melanogaster HL02152p pro...    89   4e-18
BT001463-1|AAN71218.1|  167|Drosophila melanogaster GM23292p pro...    89   4e-18
AE014134-2630|AAN10909.1|  138|Drosophila melanogaster CG13240-P...    89   4e-18
AE014134-2629|AAF53480.1|  167|Drosophila melanogaster CG13240-P...    89   4e-18

>BT023709-1|AAY85109.1|  138|Drosophila melanogaster HL02152p
           protein.
          Length = 138

 Score = 89.0 bits (211), Expect = 4e-18
 Identities = 44/79 (55%), Positives = 52/79 (65%)
 Frame = +2

Query: 17  AQTAGVKPMTIVGRVASERERCLGMTDAERAWRKQWLKDQVLAAHEPVHVEEYWRERTNP 196
           ++T GVKPM I GR+  ERER +GM+  ERAWRKQWLKDQ L  H P  V     E  NP
Sbjct: 7   SETGGVKPMVIAGRMVRERERLIGMSPEERAWRKQWLKDQEL-HHGPRKVPALELELNNP 65

Query: 197 IRRFYRKPLDVLFAKLTPM 253
           I+RFYR PLD +   L P+
Sbjct: 66  IKRFYRAPLDKVCNVLEPV 84



 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 247 PNAGEQRAAHYRYISGKLGLIAVAMLSTHYYFKYLGN--DWTK 369
           P  G QRA   R+ +GK  L    + +  YYFKY  N  +W++
Sbjct: 83  PVLGFQRAYTVRFWTGKALLALTGIYAGAYYFKYNQNVSNWSR 125


>BT001463-1|AAN71218.1|  167|Drosophila melanogaster GM23292p
           protein.
          Length = 167

 Score = 89.0 bits (211), Expect = 4e-18
 Identities = 44/79 (55%), Positives = 52/79 (65%)
 Frame = +2

Query: 17  AQTAGVKPMTIVGRVASERERCLGMTDAERAWRKQWLKDQVLAAHEPVHVEEYWRERTNP 196
           ++T GVKPM I GR+  ERER +GM+  ERAWRKQWLKDQ L  H P  V     E  NP
Sbjct: 7   SETGGVKPMVIAGRMVRERERLIGMSPEERAWRKQWLKDQEL-HHGPRKVPALELELNNP 65

Query: 197 IRRFYRKPLDVLFAKLTPM 253
           I+RFYR PLD +   L P+
Sbjct: 66  IKRFYRAPLDKVCNVLEPV 84



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/47 (48%), Positives = 29/47 (61%)
 Frame = +1

Query: 247 PNAGEQRAAHYRYISGKLGLIAVAMLSTHYYFKYLGNDWTKKGGWKV 387
           P  G QRA   R+ +GK  L    + +  YYFKY  NDWT+KGGW+V
Sbjct: 83  PVLGFQRAYTVRFWTGKALLALTGIYAGAYYFKYNQNDWTRKGGWRV 129


>AE014134-2630|AAN10909.1|  138|Drosophila melanogaster CG13240-PB,
           isoform B protein.
          Length = 138

 Score = 89.0 bits (211), Expect = 4e-18
 Identities = 44/79 (55%), Positives = 52/79 (65%)
 Frame = +2

Query: 17  AQTAGVKPMTIVGRVASERERCLGMTDAERAWRKQWLKDQVLAAHEPVHVEEYWRERTNP 196
           ++T GVKPM I GR+  ERER +GM+  ERAWRKQWLKDQ L  H P  V     E  NP
Sbjct: 7   SETGGVKPMVIAGRMVRERERLIGMSPEERAWRKQWLKDQEL-HHGPRKVPALELELNNP 65

Query: 197 IRRFYRKPLDVLFAKLTPM 253
           I+RFYR PLD +   L P+
Sbjct: 66  IKRFYRAPLDKVCNVLEPV 84



 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 247 PNAGEQRAAHYRYISGKLGLIAVAMLSTHYYFKYLGN--DWTK 369
           P  G QRA   R+ +GK  L    + +  YYFKY  N  +W++
Sbjct: 83  PVLGFQRAYTVRFWTGKALLALTGIYAGAYYFKYNQNVSNWSR 125


>AE014134-2629|AAF53480.1|  167|Drosophila melanogaster CG13240-PA,
           isoform A protein.
          Length = 167

 Score = 89.0 bits (211), Expect = 4e-18
 Identities = 44/79 (55%), Positives = 52/79 (65%)
 Frame = +2

Query: 17  AQTAGVKPMTIVGRVASERERCLGMTDAERAWRKQWLKDQVLAAHEPVHVEEYWRERTNP 196
           ++T GVKPM I GR+  ERER +GM+  ERAWRKQWLKDQ L  H P  V     E  NP
Sbjct: 7   SETGGVKPMVIAGRMVRERERLIGMSPEERAWRKQWLKDQEL-HHGPRKVPALELELNNP 65

Query: 197 IRRFYRKPLDVLFAKLTPM 253
           I+RFYR PLD +   L P+
Sbjct: 66  IKRFYRAPLDKVCNVLEPV 84



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/47 (48%), Positives = 29/47 (61%)
 Frame = +1

Query: 247 PNAGEQRAAHYRYISGKLGLIAVAMLSTHYYFKYLGNDWTKKGGWKV 387
           P  G QRA   R+ +GK  L    + +  YYFKY  NDWT+KGGW+V
Sbjct: 83  PVLGFQRAYTVRFWTGKALLALTGIYAGAYYFKYNQNDWTRKGGWRV 129


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,972,224
Number of Sequences: 53049
Number of extensions: 576875
Number of successful extensions: 1247
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)