Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1237
         (847 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899...    29   4.7  
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671...    29   4.7  

>06_03_0529 -
           21788132-21788395,21788414-21788511,21789458-21789953,
           21790033-21790134,21790218-21790270,21790354-21790414,
           21790491-21790640,21791298-21791350,21794125-21794152
          Length = 434

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 506 LQEINRALQSNTYLTGQFLTIADVAL 583
           L  +N  L SNTYL G  +T+AD+ +
Sbjct: 162 LGALNTHLASNTYLVGHSVTLADIVM 187


>02_02_0095 +
           6716327-6716335,6717302-6717451,6717523-6717583,
           6717646-6717725,6717802-6717903,6717982-6718471,
           6718796-6719171,6720320-6720379,6720887-6721056,
           6721287-6721340,6721384-6721523,6722362-6722511,
           6722582-6722642,6722705-6722784,6722933-6723034,
           6723111-6723612,6724401-6724776,6725419-6725493,
           6726058-6726198,6726264-6726282
          Length = 1065

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 506 LQEINRALQSNTYLTGQFLTIADVAL 583
           L  +N  L SNTYL G  +T+AD+ +
Sbjct: 147 LGALNTHLASNTYLVGHSVTLADIVM 172



 Score = 29.1 bits (62), Expect = 4.7
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 506 LQEINRALQSNTYLTGQFLTIADVAL 583
           L  +N  L SNTYL G  +T+AD+ +
Sbjct: 708 LGALNTHLASNTYLVGHSVTLADIVM 733


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,600,255
Number of Sequences: 37544
Number of extensions: 371048
Number of successful extensions: 544
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)