Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1237
         (847 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g44000.1 68418.m05384 glutathione S-transferase C-terminal do...    33   0.24 
At1g77290.1 68414.m09001 tetrachloro-p-hydroquinone reductive de...    29   2.9  
At1g09640.1 68414.m01081 elongation factor 1B-gamma, putative / ...    29   2.9  
At5g26710.1 68418.m03168 glutamate-tRNA ligase, putative / gluta...    29   3.9  
At1g57720.1 68414.m06549 elongation factor 1B-gamma, putative / ...    28   6.8  
At3g61880.1 68416.m06950 cytochrome P450, putative similar to cy...    28   9.0  

>At5g44000.1 68418.m05384 glutathione S-transferase C-terminal
           domain-containing protein contains Pfam domain PF00043:
           Glutathione S-transferase, C-terminal domain
          Length = 399

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = +2

Query: 479 GKFNFCIQILQEINRALQSNTYLTGQFLTIADVALY 586
           G  N     L EI   L SN YL G+ LT+ADV L+
Sbjct: 267 GAVNELFSTLDEIEDHLGSNRYLCGERLTLADVCLF 302


>At1g77290.1 68414.m09001 tetrachloro-p-hydroquinone reductive
           dehalogenase-related contains similarity to
           tetrachloro-p-hydroquinone reductive dehalogenase
           GI:148689 from [Flavobacterium sp.]
          Length = 266

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
 Frame = +2

Query: 497 IQILQEINRALQSNTYLTGQFLTIADVALYYIVXPL----LEHMSVAERDAFGSLMQMVK 664
           +++L E+   L+  TYL G   ++ADV L  ++  L    LE   ++ R        +V+
Sbjct: 169 LRLLDEVETKLEGTTYLAGNEFSMADVMLIPVLARLSLLDLEEEYISSRKNLAEYWALVR 228

Query: 665 TXXSTTREFG 694
              S  +  G
Sbjct: 229 RRPSYKKVIG 238


>At1g09640.1 68414.m01081 elongation factor 1B-gamma, putative /
           eEF-1B gamma, putative Similar to elongation factor
           1-gamma (gb|EF1G_XENLA). ESTs
           gb|T20564,gb|T45940,gb|T04527 come from this gene
          Length = 414

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 506 LQEINRALQSNTYLTGQFLTIADV 577
           L  +N  L SNTYL G  +T+AD+
Sbjct: 138 LDALNTHLTSNTYLVGHSITLADI 161


>At5g26710.1 68418.m03168 glutamate-tRNA ligase, putative /
           glutamyl-tRNA synthetase, putatuve / GluRS, putative
           identical to gi:3435196
          Length = 719

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/24 (45%), Positives = 20/24 (83%)
 Frame = +2

Query: 515 INRALQSNTYLTGQFLTIADVALY 586
           +++ L+S+T+L G  L+IADVA++
Sbjct: 104 VDKYLESSTFLVGHSLSIADVAIW 127


>At1g57720.1 68414.m06549 elongation factor 1B-gamma, putative /
           eEF-1B gamma, putative similar to elongation factor 1B
           gamma GI:3868758 from [Oryza sativa]
          Length = 413

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 506 LQEINRALQSNTYLTGQFLTIADV 577
           L+ +N  L SNT+L G  +T+AD+
Sbjct: 138 LEALNTHLASNTFLVGHSVTLADI 161


>At3g61880.1 68416.m06950 cytochrome P450, putative similar to
           cytochrome p450 SP:O48927 from [Arabidopsis thaliana]
          Length = 534

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 98  NNTLNMYIFMTLIYGMNLNYIMCIIYGDEYE 6
           +NT  +     LI   +LN +MC ++G EYE
Sbjct: 197 SNTKGLCFARDLIKTASLNNMMCSVFGKEYE 227


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,347,610
Number of Sequences: 28952
Number of extensions: 316585
Number of successful extensions: 576
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1960634400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)