Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1232
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39851-12|AAV58884.1| 137|Caenorhabditis elegans Hypothetical p... 72 5e-13
U39851-11|AAV58883.1| 171|Caenorhabditis elegans Hypothetical p... 72 5e-13
U39851-10|AAM22035.1| 144|Caenorhabditis elegans Hypothetical p... 72 5e-13
AF026213-10|AAB71301.1| 478|Caenorhabditis elegans Protein kina... 30 1.8
AF026213-9|AAB71302.2| 615|Caenorhabditis elegans Protein kinas... 30 1.8
Z82060-2|CAB04882.1| 421|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF043693-2|AAB97535.2| 351|Caenorhabditis elegans Hypothetical ... 28 5.6
AF039720-6|AAB96700.1| 347|Caenorhabditis elegans Hypothetical ... 28 5.6
AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical ... 28 7.4
Z84574-8|CAE54891.1| 921|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z35663-16|CAA84726.2| 462|Caenorhabditis elegans Hypothetical p... 27 9.8
AL022593-4|CAE54889.1| 921|Caenorhabditis elegans Hypothetical ... 27 9.8
>U39851-12|AAV58884.1| 137|Caenorhabditis elegans Hypothetical
protein C23G10.2c protein.
Length = 137
Score = 71.7 bits (168), Expect = 5e-13
Identities = 39/85 (45%), Positives = 51/85 (60%)
Frame = +2
Query: 254 ITSPEIYQPVGPYSQAILADKTLYISGILGLDRDAQMVCGGAEAQTRQALDNLRHVLEAG 433
I+S +GPYSQA+ A T+Y+SG LGLD + G QT Q+L NL VL+A
Sbjct: 10 ISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKAA 69
Query: 434 GASLESVVKTTGLLASMDDFQTFNK 508
GA +VVKTT LL ++ DF N+
Sbjct: 70 GADYGNVVKTTVLLQNIADFAAVNE 94
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 505 QIYAEYFPKACPARMTYEVSRLP 573
++Y +YF PAR Y+V+ LP
Sbjct: 94 EVYGQYFKSPYPARAAYQVAALP 116
>U39851-11|AAV58883.1| 171|Caenorhabditis elegans Hypothetical
protein C23G10.2a protein.
Length = 171
Score = 71.7 bits (168), Expect = 5e-13
Identities = 39/85 (45%), Positives = 51/85 (60%)
Frame = +2
Query: 254 ITSPEIYQPVGPYSQAILADKTLYISGILGLDRDAQMVCGGAEAQTRQALDNLRHVLEAG 433
I+S +GPYSQA+ A T+Y+SG LGLD + G QT Q+L NL VL+A
Sbjct: 44 ISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKAA 103
Query: 434 GASLESVVKTTGLLASMDDFQTFNK 508
GA +VVKTT LL ++ DF N+
Sbjct: 104 GADYGNVVKTTVLLQNIADFAAVNE 128
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 505 QIYAEYFPKACPARMTYEVSRLP 573
++Y +YF PAR Y+V+ LP
Sbjct: 128 EVYGQYFKSPYPARAAYQVAALP 150
>U39851-10|AAM22035.1| 144|Caenorhabditis elegans Hypothetical
protein C23G10.2b protein.
Length = 144
Score = 71.7 bits (168), Expect = 5e-13
Identities = 39/85 (45%), Positives = 51/85 (60%)
Frame = +2
Query: 254 ITSPEIYQPVGPYSQAILADKTLYISGILGLDRDAQMVCGGAEAQTRQALDNLRHVLEAG 433
I+S +GPYSQA+ A T+Y+SG LGLD + G QT Q+L NL VL+A
Sbjct: 17 ISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKAA 76
Query: 434 GASLESVVKTTGLLASMDDFQTFNK 508
GA +VVKTT LL ++ DF N+
Sbjct: 77 GADYGNVVKTTVLLQNIADFAAVNE 101
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 505 QIYAEYFPKACPARMTYEVSRLP 573
++Y +YF PAR Y+V+ LP
Sbjct: 101 EVYGQYFKSPYPARAAYQVAALP 123
>AF026213-10|AAB71301.1| 478|Caenorhabditis elegans Protein kinase
protein 9, isoform a protein.
Length = 478
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 526 PKACPARMTYEVSRLPWEQLWRSRPSLFAETC 621
P+ CP + Y+V RL W++L RP+ F +TC
Sbjct: 413 PEWCPEEI-YDVMRLCWQELPDDRPA-FQQTC 442
>AF026213-9|AAB71302.2| 615|Caenorhabditis elegans Protein kinase
protein 9, isoform b protein.
Length = 615
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 526 PKACPARMTYEVSRLPWEQLWRSRPSLFAETC 621
P+ CP + Y+V RL W++L RP+ F +TC
Sbjct: 550 PEWCPEEI-YDVMRLCWQELPDDRPA-FQQTC 579
>Z82060-2|CAB04882.1| 421|Caenorhabditis elegans Hypothetical
protein T27F6.2 protein.
Length = 421
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -3
Query: 513 IDLLKVWKSSMLANKPVVFTTDSNEAPPASSTCRRLSRA*RVCASAPPQTICASRSNP 340
+D ++ + P F +N P C+R +A C++APP T+ S +NP
Sbjct: 251 VDYCLTMSTTNFGSSPAGFWFSTNCNNPGYYICKR--QAGVQCSAAPPATVTPSPANP 306
>AF043693-2|AAB97535.2| 351|Caenorhabditis elegans Hypothetical
protein C34B2.3 protein.
Length = 351
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 95 TDSVIFLSFELLTYLHLKNKNELRRFC 175
T+++ L FEL L ++ KN+ ++FC
Sbjct: 78 TEAIKMLQFELFVLLTVEKKNQCKQFC 104
>AF039720-6|AAB96700.1| 347|Caenorhabditis elegans Hypothetical
protein F33D11.7 protein.
Length = 347
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 95 TDSVIFLSFELLTYLHLKNKNELRRFC 175
T+++ L FEL L ++ KN+ ++FC
Sbjct: 77 TEAIKMLQFELFVLLTVEKKNQCKQFC 103
>AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical
protein F41A4.1 protein.
Length = 696
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 297 KQF*RTRPYTFLEFSDWIEMHRWSAVVLKRRPVRLWT 407
KQF P + EF+D E H +V+K P LWT
Sbjct: 592 KQFDFPAPKSDFEFNDNGEFHEGDVIVVKHSP-NLWT 627
>Z84574-8|CAE54891.1| 921|Caenorhabditis elegans Hypothetical
protein F33E2.2b protein.
Length = 921
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = -3
Query: 492 KSSMLANKPVVFTTDSNEAPPASSTCRRLSRA*RVCASAPPQ----TICASRSNPR 337
KS+ + +PV FT DS P + + +L+R+ +AP Q CA PR
Sbjct: 652 KSTAVPGQPVFFTRDSPSRVPHARSSSKLNRSSYPSRNAPHQLEDGCCCAHARAPR 707
>Z35663-16|CAA84726.2| 462|Caenorhabditis elegans Hypothetical
protein T04A8.3 protein.
Length = 462
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -3
Query: 258 VILFLLLYCYSNFLLNSFWAKLCLRTPVQNLLSSFLFFR 142
+ + L L CY+N ++ W+ +R V N SSFL R
Sbjct: 5 IFMGLCLLCYTNAQVDRDWSFQQIRWKVTNARSSFLRHR 43
>AL022593-4|CAE54889.1| 921|Caenorhabditis elegans Hypothetical
protein F33E2.2b protein.
Length = 921
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = -3
Query: 492 KSSMLANKPVVFTTDSNEAPPASSTCRRLSRA*RVCASAPPQ----TICASRSNPR 337
KS+ + +PV FT DS P + + +L+R+ +AP Q CA PR
Sbjct: 652 KSTAVPGQPVFFTRDSPSRVPHARSSSKLNRSSYPSRNAPHQLEDGCCCAHARAPR 707
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,203,556
Number of Sequences: 27780
Number of extensions: 353062
Number of successful extensions: 1022
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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