Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1228
(598 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 111 9e-24
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 99 4e-20
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 95 1e-18
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 90 3e-17
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 82 1e-14
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 80 4e-14
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 78 1e-13
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 74 2e-12
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 66 4e-10
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 65 1e-09
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 62 1e-08
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 60 3e-08
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 60 5e-08
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 58 2e-07
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 55 1e-06
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 53 6e-06
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 52 8e-06
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 50 4e-05
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 50 5e-05
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 49 7e-05
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 49 7e-05
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 47 3e-04
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 47 3e-04
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 46 7e-04
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 45 0.001
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 45 0.001
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 45 0.002
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 44 0.002
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 43 0.006
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 42 0.008
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 42 0.008
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 42 0.015
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 42 0.015
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 42 0.015
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 40 0.034
UniRef50_UPI00015B4F87 Cluster: PREDICTED: similar to prophenolo... 40 0.044
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 40 0.059
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 39 0.078
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 39 0.10
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 38 0.14
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.14
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 38 0.18
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 37 0.31
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 36 0.55
UniRef50_A0UVM0 Cluster: Signal peptidase I precursor; n=2; Clos... 35 1.7
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 35 1.7
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 35 1.7
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 34 2.2
UniRef50_Q95S25 Cluster: GM14169p; n=3; Sophophora|Rep: GM14169p... 34 2.9
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 34 2.9
UniRef50_A5BIP3 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 33 3.9
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 33 3.9
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 33 5.1
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 33 6.7
UniRef50_Q6SLB5 Cluster: Putative histidine kinase HHK6p; n=2; G... 33 6.7
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 33 6.7
UniRef50_A6S819 Cluster: Citrate synthase; n=1; Botryotinia fuck... 32 8.9
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 32 8.9
UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellula... 32 8.9
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 111 bits (268), Expect = 9e-24
Identities = 52/79 (65%), Positives = 64/79 (81%)
Frame = +1
Query: 22 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGS 201
+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG+
Sbjct: 2 RTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFGT 61
Query: 202 KKELAAVRTVCSHVENMIK 258
KKELAAVRTVCSH+ENMIK
Sbjct: 62 KKELAAVRTVCSHIENMIK 80
Score = 80.6 bits (190), Expect = 3e-14
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
KGVT GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEK
Sbjct: 80 KGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEK 119
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = +2
Query: 362 LG*EIIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAL 490
LG + IRRV+MAPGVTVVNS QKDELI+EGN +E VS SAAL
Sbjct: 116 LGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAAL 158
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 99 bits (238), Expect = 4e-20
Identities = 43/79 (54%), Positives = 59/79 (74%)
Frame = +1
Query: 22 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGS 201
K + +N V PDG+T VK+R+V V GPRG LKR+F+HL +++ V L+V KWFG
Sbjct: 2 KLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFGV 61
Query: 202 KKELAAVRTVCSHVENMIK 258
+KE+AA+RTVCSH++NMIK
Sbjct: 62 RKEIAAIRTVCSHIQNMIK 80
Score = 68.1 bits (159), Expect = 1e-10
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
KGVTKGF+YKMR+VYAHFPIN +G +EIRNFLGEK
Sbjct: 80 KGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEK 119
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 94.7 bits (225), Expect = 1e-18
Identities = 41/81 (50%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = +1
Query: 22 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV--NPRLLKVEKWF 195
K I++NQ V IP+ + + +K R V VKGPRG L+R+F H+ V++ ++ + L+V+KW+
Sbjct: 2 KTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWW 61
Query: 196 GSKKELAAVRTVCSHVENMIK 258
G++KELA VRT+CSHV+NMIK
Sbjct: 62 GNRKELATVRTICSHVQNMIK 82
Score = 68.9 bits (161), Expect = 8e-11
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
KGVT GF+YKMR+VYAHFPIN V E S++EIRNFLGEK
Sbjct: 82 KGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEK 121
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/43 (62%), Positives = 32/43 (74%)
Frame = +2
Query: 362 LG*EIIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAL 490
LG + IRRV+M PGV S QKDELI+EGN +E VS+SAAL
Sbjct: 118 LGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAAL 160
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 90.2 bits (214), Expect = 3e-17
Identities = 39/79 (49%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = +1
Query: 22 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWFG 198
K I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WFG
Sbjct: 2 KTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWFG 61
Query: 199 SKKELAAVRTVCSHVENMI 255
+++ +AA+RT SHV+N+I
Sbjct: 62 TRRTMAAIRTAISHVQNLI 80
Score = 66.1 bits (154), Expect = 6e-10
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
GVTKG++YKMR VYAHFPIN T N+ IEIRNFLGEK
Sbjct: 82 GVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEK 120
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +2
Query: 362 LG*EIIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAL 490
LG + +R+V M GVT++ S K KDEL+++GN +E VS SAAL
Sbjct: 117 LGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAAL 159
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 81.8 bits (193), Expect = 1e-14
Identities = 38/81 (46%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Frame = +1
Query: 22 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKWF 195
K I++NQ V IP + + +K R V VKGP+G L R+F H+ V++ ++ +L K V+KW+
Sbjct: 2 KTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKWW 61
Query: 196 GSKKELAAVRTVCSHVENMIK 258
G++KELA V T+CS V+N IK
Sbjct: 62 GNRKELATVHTICSPVQNTIK 82
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 79.8 bits (188), Expect = 4e-14
Identities = 38/78 (48%), Positives = 54/78 (69%)
Frame = +1
Query: 22 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGS 201
K I Q++++P+G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G
Sbjct: 2 KYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNGG 61
Query: 202 KKELAAVRTVCSHVENMI 255
+K +AA+RTV S V+NMI
Sbjct: 62 RKHVAALRTVKSLVDNMI 79
Score = 58.8 bits (136), Expect = 9e-08
Identities = 27/41 (65%), Positives = 32/41 (78%), Gaps = 2/41 (4%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPI--NCVTTEGNSIIEIRNFLGEK 374
GVTKG++YKMR VYAHFPI N V +G IE+RNFLG+K
Sbjct: 81 GVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDK 121
Score = 43.2 bits (97), Expect = 0.005
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +2
Query: 362 LG*EIIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAA 487
LG + IR V + GVT+ S KDE+++ GNS+EDVS +AA
Sbjct: 118 LGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAA 159
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 78.2 bits (184), Expect = 1e-13
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 4/164 (2%)
Frame = +1
Query: 64 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHV 243
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 244 ENMIKE*LKASNTRCVLCMLTSPLTVSPL---RVIQLLRYVTSWVRNHQKGKDGTWCDCR 414
ENMI K + P+ V+ RV+++ + + + DG C
Sbjct: 94 ENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRN 153
Query: 415 *LSKTK-G*TNH*RQLFGRCL*LCCSHPAIYYIKNXDIRKFLDG 543
+K + T + +L + C + IK D+RKFLDG
Sbjct: 154 EKAKDEIVLTGNSLELLSQS---CATIQLRSAIKYKDVRKFLDG 194
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 74.1 bits (174), Expect = 2e-12
Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Frame = +1
Query: 22 KQIVANQKVKIP-DGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVEK 189
K I + ++IP DG TV V KSR + V G G L+R F+H+ VD+++V R + VE
Sbjct: 61 KTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVEM 120
Query: 190 WFGSKKELAAVRTVCSHVENMI 255
WFG K A +RTVCSH+ENMI
Sbjct: 121 WFGLTKNKACIRTVCSHIENMI 142
Score = 50.4 bits (115), Expect = 3e-05
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 365
GV + +QYK+R VYAHFPIN T S IEIRNFL
Sbjct: 144 GVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 66.5 bits (155), Expect = 4e-10
Identities = 31/78 (39%), Positives = 50/78 (64%)
Frame = +1
Query: 22 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGS 201
+ I ++ + IP G+TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKK-QGNTIKFIVWHGS 61
Query: 202 KKELAAVRTVCSHVENMI 255
+K A +R+V S + NMI
Sbjct: 62 RKHNACIRSVYSIINNMI 79
Score = 64.9 bits (151), Expect = 1e-09
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
GVT+GF+YKMR VYAHFPIN TE +++EIRNFLGE+
Sbjct: 81 GVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGER 119
Score = 49.6 bits (113), Expect = 5e-05
Identities = 26/42 (61%), Positives = 30/42 (71%)
Frame = +2
Query: 362 LG*EIIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAA 487
LG I R +K PGVTV S KDE+I+EGNSLE+VS SAA
Sbjct: 116 LGERITRVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAA 157
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +1
Query: 28 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 207
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHAND-TISVAVWFPRGK 61
Query: 208 ELAAVRTVCSHVENMIK 258
A RT+CSH+ENM K
Sbjct: 62 RNALPRTICSHIENMFK 78
Score = 54.8 bits (126), Expect = 1e-06
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 365
KGVT GF+YKMR YAHFPI + N IEIRNF+
Sbjct: 78 KGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFM 114
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +2
Query: 380 RRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAA 487
RR++ PGVT+ S KDELI+ G S+EDVS +AA
Sbjct: 120 RRIECLPGVTIAMSTNVKDELILRGISIEDVSHTAA 155
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 63.7 bits (148), Expect = 3e-09
Identities = 29/40 (72%), Positives = 30/40 (75%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
KGVT GFQYKMRAVYAHFPIN + EIRNFLGEK
Sbjct: 142 KGVTVGFQYKMRAVYAHFPINIIIAGDKKSAEIRNFLGEK 181
Score = 42.7 bits (96), Expect = 0.006
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +2
Query: 362 LG*EIIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAL 490
LG + +R + M GVT+ QKD++++EGN ++ VS SAAL
Sbjct: 178 LGEKRVRNIAMLEGVTIQEDKAQKDQVLVEGNDIDLVSQSAAL 220
Score = 32.7 bits (71), Expect = 6.7
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 25 QIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRN 129
QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 3 QIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 61.7 bits (143), Expect = 1e-08
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Frame = +1
Query: 22 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------L 174
K I+ + V IP+ + + KS++V VKGPRG L +NF+H A+DI++ VN +
Sbjct: 2 KYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKSR 61
Query: 175 LKVEKWFGSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPL---RVIQL 345
+ V W +K+ V +V S + NMI+ + VL P+ ++ + + +++
Sbjct: 62 VSVRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEI 121
Query: 346 LRYVTSWVRNHQKGKDGTWCDCR*LSKTKG*TNH*RQLFGRCL*LCCSHPAIYYIKNXDI 525
++ + K G + T L L H A +KN DI
Sbjct: 122 KNFLGEKIIRTIKCLPGVTITRNEAEEKNVLTLQGNDLNNVSLTCALIHQAC-AVKNKDI 180
Query: 526 RKFLDG 543
R+FLDG
Sbjct: 181 RQFLDG 186
Score = 46.4 bits (105), Expect = 5e-04
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +3
Query: 201 QKGACRREDSLFTCREHDKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
+K C+ R +GVT G+++KM YAHFPI +EI+NFLGEK
Sbjct: 71 RKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEK 128
Score = 40.3 bits (90), Expect = 0.034
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +2
Query: 362 LG*EIIRRVKMAPGVTVV-NSPKQKDELIIEGNSLEDVSSSAAL 490
LG +IIR +K PGVT+ N ++K+ L ++GN L +VS + AL
Sbjct: 125 LGEKIIRTIKCLPGVTITRNEAEEKNVLTLQGNDLNNVSLTCAL 168
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/81 (34%), Positives = 50/81 (61%), Gaps = 9/81 (11%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKW 192
+ V IP+G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 193 FGSKKELAAVRTVCSHVENMI 255
+G++++ A VRT+ SH++NMI
Sbjct: 69 YGNRRDSAVVRTIASHIKNMI 89
Score = 59.7 bits (138), Expect = 5e-08
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
GVTKG+QYKMR VYAHFP+ V + I+++NFLGEK
Sbjct: 91 GVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEK 129
Score = 32.7 bits (71), Expect = 6.7
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 362 LG*EIIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAA 487
LG + R ++M GV V KDE+ +EGN +E VS SAA
Sbjct: 126 LGEKRTRHIEMYDGVVV--KKLGKDEICLEGNDVEKVSQSAA 165
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 59.7 bits (138), Expect = 5e-08
Identities = 33/94 (35%), Positives = 55/94 (58%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 219
++++IP+G+ V V+ V VKGP+G L+R K+ V I + +++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 220 VRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTV 321
VRT +H+ NMIK + R + P+TV
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMTV 101
Score = 50.0 bits (114), Expect = 4e-05
Identities = 21/41 (51%), Positives = 33/41 (80%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKS 377
KGVT+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK+
Sbjct: 80 KGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKN 118
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 57.6 bits (133), Expect = 2e-07
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +1
Query: 37 NQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKWFGSKKE 210
NQ VKIP+ + +V VK RG L+R+F H+ +++R++ R L+V+KW + K
Sbjct: 7 NQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKWLKTMK- 59
Query: 211 LAAVRTVCSHVENMIK 258
LA T+ SHV+NMIK
Sbjct: 60 LATAHTIYSHVQNMIK 75
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
GV+ GF+Y ++ +YAHFPIN T+ S +EIRNFLGEK
Sbjct: 82 GVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEK 120
Score = 50.4 bits (115), Expect = 3e-05
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWFGSKKELA 216
+K+KIP + + K+R ++ G G + R+F+ + IR + + + W KK+LA
Sbjct: 8 RKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWMAGKKQLA 67
Query: 217 AVRTVCSHVENMI 255
+ T+ SH+ NMI
Sbjct: 68 KLNTIASHITNMI 80
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 52.8 bits (121), Expect = 6e-06
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWFGSKKELA 216
+ V IP+G+ VHV + V V+GP G ++++F H + IR V + VE + +KK+ A
Sbjct: 8 ESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFHATKKDYA 66
Query: 217 AVRTVCSHVENMI 255
V T+ S + NMI
Sbjct: 67 LVGTIASIINNMI 79
Score = 46.8 bits (106), Expect = 4e-04
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
GVTKG++YK++ VYAHFP++ + E + II I NFLGE+
Sbjct: 81 GVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGER 117
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 52.4 bits (120), Expect = 8e-06
Identities = 24/41 (58%), Positives = 33/41 (80%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKS 377
KGVT+GF YK++ VY+HFPI+ V +G+ +I I NFLGEK+
Sbjct: 80 KGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKA 118
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/73 (36%), Positives = 45/73 (61%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 219
++V+IP+G+ V V+ V VKGP+G L+R F + I + ++ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAI 67
Query: 220 VRTVCSHVENMIK 258
RT +H+ NMIK
Sbjct: 68 ARTFAAHIRNMIK 80
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 50.0 bits (114), Expect = 4e-05
Identities = 23/51 (45%), Positives = 34/51 (66%)
Frame = +3
Query: 222 EDSLFTCREHDKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
++ L +C EHD+G GF Y+MR+VYA FP N + E S+IE + +G+K
Sbjct: 20 QNHLQSCSEHDQG---GFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKK 67
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 49.6 bits (113), Expect = 5e-05
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
GV +GF+Y ++ VYAHFPI V EGN +I I NF+GEK
Sbjct: 99 GVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIGEK 135
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 49.2 bits (112), Expect = 7e-05
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKS 377
K VT GF Y M+AVY HF IN E I+ ++NFLGEK+
Sbjct: 99 KAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVKNFLGEKN 139
Score = 39.1 bits (87), Expect = 0.078
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 25 QIVANQKVKIPDGLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLLKVEKWFG 198
+I+ + VK+P+ T + ++ T +GP+G +++ +H L DI N +++ W G
Sbjct: 23 RILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---IRIRLWNG 79
Query: 199 SKKELAAVRTVCSHVENMIK 258
+K +A TV S + N IK
Sbjct: 80 KRKAMALAITVESLLRNAIK 99
Score = 33.1 bits (72), Expect = 5.1
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +2
Query: 362 LG*EIIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSA 484
LG + ++R +M G V ++KD ++IEG SL DVS SA
Sbjct: 135 LGEKNVKRFRMR-GAARVRLDERKDTIVIEGPSLSDVSQSA 174
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 49.2 bits (112), Expect = 7e-05
Identities = 24/97 (24%), Positives = 51/97 (52%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 210
+ ++ IP+ + V ++ ++ V GP+G ++R F H + + VN + +E +F +++E
Sbjct: 5 IIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKL-SVNDNKIILETYFATRRE 63
Query: 211 LAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTV 321
+ T SH++NM++ R +C P+ V
Sbjct: 64 KRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMRV 100
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Frame = +3
Query: 210 ACRREDSLF-TCREHDKGVTKGFQ----YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
A RRE L T R H K + +G Q Y+++ Y HFP+ V EGN +I + NFLGEK
Sbjct: 59 ATRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEK 116
Query: 375 S 377
+
Sbjct: 117 A 117
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 47.2 bits (107), Expect = 3e-04
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
+GV G++Y+M+ VY+HFPI + +GN +EI NFLGEK
Sbjct: 76 RGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEK 113
Score = 42.3 bits (95), Expect = 0.008
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 219
++V+IP G+ V + ++TV GP+G L R+ + +D+ MV + V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 220 VRTVCSHVENMIK 258
T+ +H +NMI+
Sbjct: 64 TGTLEAHAKNMIR 76
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 47.2 bits (107), Expect = 3e-04
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKS 377
GVT+G++YK++ +Y HFP+ V +GN ++ I NFLG KS
Sbjct: 85 GVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKS 122
Score = 33.1 bits (72), Expect = 5.1
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSR-----LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSK 204
++V+IP G++V ++ +V VKGP G + + FK+ V + + + +++ +E + K
Sbjct: 8 EEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-MEVFKARK 66
Query: 205 KELAAVRTVCSHVENM 252
+E A + T ++NM
Sbjct: 67 REYAILGTYKGILKNM 82
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 46.0 bits (104), Expect = 7e-04
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKS 377
+GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLGEKS
Sbjct: 79 EGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKS 117
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/79 (27%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +1
Query: 22 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFG 198
K ++++IPD + V +++ ++ VKGP+G + ++F + A IR+ +N + +E F
Sbjct: 5 KAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTFA 63
Query: 199 SKKELAAVRTVCSHVENMI 255
+++ A + ++ +H++NMI
Sbjct: 64 DRRKKALLYSIIAHIKNMI 82
Score = 32.7 bits (71), Expect = 6.7
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKS 377
G G++Y ++ + HFPI+ V G+ +++ N +GEK+
Sbjct: 84 GTINGYRYYLKVISTHFPIS-VKVSGDE-VQVSNLIGEKN 121
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
GV++GF+ KM VYAHFP+ V EG +++ I NFLGEK
Sbjct: 79 GVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEK 115
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/70 (30%), Positives = 42/70 (60%)
Frame = +1
Query: 46 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 225
++IP+G++V + + T KGP+G ++R F + + I + ++ V+ K++ A V
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVG 67
Query: 226 TVCSHVENMI 255
T SH++N+I
Sbjct: 68 TFASHLKNLI 77
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKS 377
GVT+G++Y M Y+HFP+ V EG+ ++ I NFLGEK+
Sbjct: 76 GVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKA 113
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/41 (46%), Positives = 31/41 (75%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKS 377
KG+ +GFQY+M+ Y+HFP+ V+ +G +++ I NF GE+S
Sbjct: 79 KGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGERS 117
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 42.7 bits (96), Expect = 0.006
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 371
KGVT+G +YK++ VY+HFP + + I NF+GE
Sbjct: 97 KGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGE 135
Score = 33.5 bits (73), Expect = 3.9
Identities = 21/82 (25%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Frame = +1
Query: 28 IVANQKVKIPDGLTVHVKSRL-----VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKW 192
IV ++VKI D + + + R VTVKGP+G + + F + V + + + ++ +
Sbjct: 17 IVMEERVKIKDDVEIEISQREDRRYEVTVKGPKGEVTKEFYYPDVYLWVEDDEVV-IAAT 75
Query: 193 FGSKKELAAVRTVCSHVENMIK 258
++++ A + + +++ENM K
Sbjct: 76 RSNRRQKAILGMIKAYIENMQK 97
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 42.3 bits (95), Expect = 0.008
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLK----VEKWF 195
+A++ IPDG+ + V + + +KG G L N ++L VD R N ++K V K
Sbjct: 6 IADKPTIIPDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRS 64
Query: 196 GSKKELAAVR-TVCSHVENMIK 258
+K L A+R T SHV NMIK
Sbjct: 65 SDEKRLKALRGTFTSHVRNMIK 86
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 42.3 bits (95), Expect = 0.008
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
+GV GF+YK++AVY+HFP+ + GN + + N GEK
Sbjct: 80 RGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK 117
Score = 37.9 bits (84), Expect = 0.18
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +1
Query: 43 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 222
K+ +P+G+T V VTV L R F+H +++R + L+V KKE A
Sbjct: 10 KISLPEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGE-LEVFVNLPRKKEKALA 68
Query: 223 RTVCSHVENMIK 258
T +H+ NM +
Sbjct: 69 GTWAAHLTNMAR 80
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 41.5 bits (93), Expect = 0.015
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCV 323
KGV+ GF+YK+R+VYAHFP+N V
Sbjct: 47 KGVSLGFRYKVRSVYAHFPLNVV 69
Score = 39.1 bits (87), Expect = 0.078
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = +2
Query: 386 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAAL 490
V+M GV S QKDELI+EGN E VS+SAAL
Sbjct: 69 VQMRTGVACSVSQAQKDELILEGNDTELVSNSAAL 103
Score = 37.1 bits (82), Expect = 0.31
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +1
Query: 205 KELAAVRTVCSHVENMIK 258
KELA VRT+CSHV+NMIK
Sbjct: 30 KELATVRTICSHVQNMIK 47
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 41.5 bits (93), Expect = 0.015
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
GV+KGF Y ++ VY+HFPI+ + + +EI N G K
Sbjct: 83 GVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGLK 121
Score = 40.3 bits (90), Expect = 0.034
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 22 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI--RMVNPRLLKVEKWF 195
K ++ + +P + + +K + + KG G L + F + V+I + + L V ++
Sbjct: 2 KHVLVQSIINVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCYY 61
Query: 196 GSKKELAAVRTVCSHVENMI 255
+K A VRT+ S + NMI
Sbjct: 62 NNKSSSAIVRTITSIIYNMI 81
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 41.5 bits (93), Expect = 0.015
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
GVT G++YKM VY+HFPI +E + F+G K
Sbjct: 89 GVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMGHK 127
Score = 38.7 bits (86), Expect = 0.10
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Frame = +1
Query: 22 KQIVANQKVKIPDGLTVHVKSRLVTVK--GPR----GVLKRNFKHLAVDIRM-VNPRLLK 180
+ ++ + KIP+ + VKS +VT++ P+ L ++ HL +D N +
Sbjct: 3 RPVLHQEHFKIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIV 62
Query: 181 VEKWFGSKKELAAVRTVCSHVENMI 255
WFG++K LA + T+ V+NMI
Sbjct: 63 ARCWFGNRKLLARIGTLFGIVKNMI 87
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 40.3 bits (90), Expect = 0.034
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKS 377
+G+ +G+ KM+ V+AHFPI V EG I+ I NF GE++
Sbjct: 82 EGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERA 120
Score = 38.3 bits (85), Expect = 0.14
Identities = 21/93 (22%), Positives = 49/93 (52%)
Frame = +1
Query: 43 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 222
+V+IP+G+TV ++ +GP G +NF+++ V I + + + + ++ K++ A +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGK-VNLKTIGERKRDYAIL 70
Query: 223 RTVCSHVENMIKE*LKASNTRCVLCMLTSPLTV 321
T S + N+ + ++ + + P+TV
Sbjct: 71 HTARSIIRNICEGLVEGYTIKMKVVFAHFPITV 103
>UniRef50_UPI00015B4F87 Cluster: PREDICTED: similar to
prophenoloxidase; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to prophenoloxidase - Nasonia
vitripennis
Length = 994
Score = 39.9 bits (89), Expect = 0.044
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 320 TVNGEVSIHSTHLVLEAFSYSFIMFSTCEQTVLTAASSFLDPNHFSTFRRRGFT-MRMST 144
T G V HL + FSYSF++ +T Q V F+ P + T R F R+
Sbjct: 773 TPRGSVLARLQHLNHDEFSYSFVVNNTNNQEVTGTVRVFIAPKYDETGRALSFNDQRLLM 832
Query: 143 AKCLKFLLRTPRGPLTVTR 87
+ KF R RG TV R
Sbjct: 833 IEMDKFTTRLRRGQNTVNR 851
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 39.5 bits (88), Expect = 0.059
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +1
Query: 22 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH--LAVDIRMVNPRL 174
K+++ +KV+IP+G +V + R++TV+G R R+ H L +D+ + RL
Sbjct: 2 KRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMDVHEGHVRL 54
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 39.1 bits (87), Expect = 0.078
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 210
V + V+IP+G+ + + + VTVKGP+G L R H + I + +L VE+ K+
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEH 61
Query: 211 LAAVRTVCSHVENMI 255
A T S + NM+
Sbjct: 62 RALHGTTRSLINNMV 76
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 38.7 bits (86), Expect = 0.10
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKK 207
VA VK+P G+ V + +L++VKGP+G L+ H +V++ +V L+ G ++
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIVEEAGELRFAARNGDQQ 62
Query: 208 ELAAVRTVCSHVENMIK 258
A T + V NM++
Sbjct: 63 TRAMAGTTRALVNNMVQ 79
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 38.3 bits (85), Expect = 0.14
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 9/67 (13%)
Frame = +1
Query: 85 RLVTVKGPRGVLKRNFKHLAVDIRMVNP-------RLLKVE--KWFGSKKELAAVRTVCS 237
+L+ + GPRG+L RNFKH ++DI++ L+K+E K+ V+++ +
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQVQKEIKEIKQIGLIKIEYQDVVQYSKQRFQVKSIAA 112
Query: 238 HVENMIK 258
++NMI+
Sbjct: 113 QIKNMIR 119
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 38.3 bits (85), Expect = 0.14
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK 135
+ +K+P G+ V + VTVKGP+G L R+F+
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFR 38
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 37.9 bits (84), Expect = 0.18
Identities = 18/42 (42%), Positives = 29/42 (69%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKSS 380
+GV G+ K++ VYAHFPI + +G ++I + NF GE+S+
Sbjct: 64 EGVGVGYTIKLKVVYAHFPIT-IKQDG-AMILVENFQGERSA 103
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 37.1 bits (82), Expect = 0.31
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF 132
+A + + +P G+TV +K +V VKGP+G L + F
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEF 37
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 36.3 bits (80), Expect = 0.55
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH 138
+ N+ V IP G+TV + R + V+GP+G K +FKH
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKH 37
>UniRef50_A0UVM0 Cluster: Signal peptidase I precursor; n=2;
Clostridium|Rep: Signal peptidase I precursor -
Clostridium cellulolyticum H10
Length = 189
Score = 34.7 bits (76), Expect = 1.7
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -1
Query: 280 YWKPLVTPLSCSLHVNRLSSRRQAPFWIRTISQPSGDE 167
+W ++ PL ++ V+R S Q FW++ + +GDE
Sbjct: 80 FWDNVIDPLKYNILVSRFSDNNQQVFWVKRVIGKAGDE 117
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 34.7 bits (76), Expect = 1.7
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLK 123
+ + V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 34.7 bits (76), Expect = 1.7
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL 174
VA +KIP G+ V+V + +TVKG G L R H AV + + L
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAEL 51
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 34.3 bits (75), Expect = 2.2
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFKH 138
V N+ +++P+ + V +K R ++V+GP+G L+ F H
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNH 40
>UniRef50_Q95S25 Cluster: GM14169p; n=3; Sophophora|Rep: GM14169p -
Drosophila melanogaster (Fruit fly)
Length = 730
Score = 33.9 bits (74), Expect = 2.9
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +1
Query: 178 KVEKWFGSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLR 351
++E+ G++ E A+++ H+E +KE +K + C+ L SP+ + R+ QLL+
Sbjct: 316 RLEREEGARAEAASLQVKLLHMEQELKEWVKVAQDHCLANTLVSPMALRS-RIEQLLK 372
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 33.9 bits (74), Expect = 2.9
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -3
Query: 251 MFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTA--KCLKFLLRTPRGPLTVTRRDF 78
+F+ C ++V+ A+S L P+H + R GF + TA + FL R PL + R F
Sbjct: 24 LFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTATGEFRLFLTYLDRIPLDASLRCF 83
Query: 77 T 75
+
Sbjct: 84 S 84
>UniRef50_A5BIP3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1227
Score = 33.5 bits (73), Expect = 3.9
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = -2
Query: 537 QELSDIXILDVVDCWMRAAELETSSKELPSMISSSFCFGELTTVTPGAIFTLLMISH 367
+EL + L++V+C + A L+ + M+ FGEL TP + FT L SH
Sbjct: 821 EELPSLTKLEIVECGLLVASLQVPAIRELKMVG----FGELQLKTPASGFTALQTSH 873
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 33.5 bits (73), Expect = 3.9
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 46 VKIPDGLTVHVKSRLVTVKGPRGVLKR 126
+ IP G+TV +K +VTVKGP+G L +
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ 35
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 33.5 bits (73), Expect = 3.9
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 207
V + ++IP +TV + + V VKGP+G L R F H ++I+ V +L V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 208 ELAAVRTVCSHVENMIK 258
A T S + NM++
Sbjct: 62 HRALHGTTRSLLGNMVE 78
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 33.1 bits (72), Expect = 5.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 126
+ + IPD ++V + VTVKGP+G LKR
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKR 35
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 32.7 bits (71), Expect = 6.7
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 159
+ N+ + +P G+ + +VTVKGP+G L R F ++IR+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIRV 45
>UniRef50_Q6SLB5 Cluster: Putative histidine kinase HHK6p; n=2;
Gibberella|Rep: Putative histidine kinase HHK6p -
Gibberella moniliformis (Fusarium verticillioides)
Length = 1369
Score = 32.7 bits (71), Expect = 6.7
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = +1
Query: 178 KVEKWFGSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCML-----TSPLTVSPLRVIQ 342
KVEKWFG+ C+ V I+ + A TR L + + TV P R +
Sbjct: 611 KVEKWFGT----------CTDVHESIQTKMSAKRTRQQLLSVIAHSHVTIFTVDPNRRVT 660
Query: 343 LLRYVTSWVRNHQKGKDGT 399
+L W H++ DGT
Sbjct: 661 MLEGALIWNNTHEENHDGT 679
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 32.7 bits (71), Expect = 6.7
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 126
+ + IPD + V + VTVKGP+G LKR
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKR 35
>UniRef50_A6S819 Cluster: Citrate synthase; n=1; Botryotinia
fuckeliana B05.10|Rep: Citrate synthase - Botryotinia
fuckeliana B05.10
Length = 534
Score = 32.3 bits (70), Expect = 8.9
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -3
Query: 338 ITLSGDTVNGEVSIHSTHLVLEAFSYSFIMFS 243
+ L GD G VS H+THLV A S F+ +S
Sbjct: 297 LALHGDHEGGNVSAHTTHLVGSALSDPFLSYS 328
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 32.3 bits (70), Expect = 8.9
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 46 VKIPDGLTVHVKSRLVTVKGPRGVLKRNF 132
+++PD +TV + +TVKGP+G L R F
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYF 37
>UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellular
organisms|Rep: 50S ribosomal protein L6 - Deinococcus
radiodurans
Length = 185
Score = 32.3 bits (70), Expect = 8.9
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 210
+ Q + +P G+TV+ + + VKGP+G L + + + +R +LL VE+ ++K
Sbjct: 4 IGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPY-NTELTVRQDGDQLL-VERPSDAQKH 61
Query: 211 LAAVRTVCSHVENMIK 258
A + V N +K
Sbjct: 62 RALHGLTRTLVANAVK 77
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,577,118
Number of Sequences: 1657284
Number of extensions: 11562996
Number of successful extensions: 27542
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 26815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27523
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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