Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1227
         (389 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   2.9  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   3.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   3.8  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   5.0  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   5.0  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   5.0  
X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.           20   8.7  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    20   8.7  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 361  ALYISLIAFSAKISXNSTGNQSRXMSLEP 275
            A+Y  +IA +   S  S GNQ + +  +P
Sbjct: 1271 AVYARVIAPTTITSSQSPGNQQQTIQTQP 1299


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 88  VPNDILEEQLYNSVVVADYDSAVEK 162
           VP+++  + LYN +VV++  S   K
Sbjct: 566 VPDEVPSDVLYNRLVVSEDGSETFK 590


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 88  VPNDILEEQLYNSVVVADYDSAVEK 162
           VP+++  + LYN +VV++  S   K
Sbjct: 566 VPDEVPSDVLYNRLVVSEDGSETFK 590


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 180 GEEERSHXKCREQTDXKXQDELHGV 254
           GE   S  + RE    +  D+LH V
Sbjct: 249 GERSCSRDRSREYKKDRRYDQLHNV 273


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 183 EEERSHXKCREQTDXKXQDELH 248
           +EER   K R+Q++ +    LH
Sbjct: 181 QEERQRTKERDQSEVESTSSLH 202


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 183 EEERSHXKCREQTDXKXQDELH 248
           +EER   K R+Q++ +    LH
Sbjct: 181 QEERQRTKERDQSEVESTSSLH 202


>X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.
          Length = 103

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -3

Query: 123 IVKLLLQNVVRD 88
           ++K+ L+NV+RD
Sbjct: 58  VLKVFLENVIRD 69


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 293 PGLVPS*VXTYLRRKRD*AYVQ 358
           PG VP  + +Y  R R  +Y+Q
Sbjct: 41  PGCVPKPIPSYACRGRCSSYLQ 62


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,290
Number of Sequences: 438
Number of extensions: 1179
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)