Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1226
(608 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 46 1e-06
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 46 1e-06
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 46 1e-06
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 46 1e-06
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 27 0.63
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 26 0.83
AF020851-1|AAC31864.1| 214|Anopheles gambiae unknown protein. 24 4.4
AF020850-1|AAC31863.1| 214|Anopheles gambiae unknown protein. 24 4.4
AF020849-1|AAC31862.1| 214|Anopheles gambiae unknown protein. 24 4.4
AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein. 23 7.7
AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein. 23 7.7
AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P... 23 7.7
AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14... 23 7.7
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 46.0 bits (104), Expect = 1e-06
Identities = 35/80 (43%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +3
Query: 378 HYTEGAELVDSVLDVRSKGSGXV*LPPGIPTDTLARXRHXFRYGTLLISKIREQVP*QNN 557
HYTEGAELVD+VLDV K G GTLLISKIRE+ P
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP---- 56
Query: 558 EHIIQXYHYL---KCSDTVV 608
+ I+ Y + K SDTVV
Sbjct: 57 DRIMNTYSVVPSPKVSDTVV 76
Score = 43.6 bits (98), Expect = 5e-06
Identities = 21/46 (45%), Positives = 22/46 (47%)
Frame = +1
Query: 427 RKEAEXCDCLQGFQXXXXXXXXXXXXMAPFXSPKSENKXPDRIMNT 564
RKE E CDCLQGFQ M K + PDRIMNT
Sbjct: 17 RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNT 62
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 46.0 bits (104), Expect = 1e-06
Identities = 35/80 (43%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +3
Query: 378 HYTEGAELVDSVLDVRSKGSGXV*LPPGIPTDTLARXRHXFRYGTLLISKIREQVP*QNN 557
HYTEGAELVD+VLDV K G GTLLISKIRE+ P
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP---- 56
Query: 558 EHIIQXYHYL---KCSDTVV 608
+ I+ Y + K SDTVV
Sbjct: 57 DRIMNTYSVVPSPKVSDTVV 76
Score = 43.6 bits (98), Expect = 5e-06
Identities = 21/46 (45%), Positives = 22/46 (47%)
Frame = +1
Query: 427 RKEAEXCDCLQGFQXXXXXXXXXXXXMAPFXSPKSENKXPDRIMNT 564
RKE E CDCLQGFQ M K + PDRIMNT
Sbjct: 17 RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNT 62
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 46.0 bits (104), Expect = 1e-06
Identities = 35/80 (43%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +3
Query: 378 HYTEGAELVDSVLDVRSKGSGXV*LPPGIPTDTLARXRHXFRYGTLLISKIREQVP*QNN 557
HYTEGAELVD+VLDV K G GTLLISKIRE+ P
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP---- 56
Query: 558 EHIIQXYHYL---KCSDTVV 608
+ I+ Y + K SDTVV
Sbjct: 57 DRIMNTYSVVPSPKVSDTVV 76
Score = 43.6 bits (98), Expect = 5e-06
Identities = 21/46 (45%), Positives = 22/46 (47%)
Frame = +1
Query: 427 RKEAEXCDCLQGFQXXXXXXXXXXXXMAPFXSPKSENKXPDRIMNT 564
RKE E CDCLQGFQ M K + PDRIMNT
Sbjct: 17 RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNT 62
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 46.0 bits (104), Expect = 1e-06
Identities = 35/80 (43%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +3
Query: 378 HYTEGAELVDSVLDVRSKGSGXV*LPPGIPTDTLARXRHXFRYGTLLISKIREQVP*QNN 557
HYTEGAELVD+VLDV K G GTLLISKIRE+ P
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP---- 56
Query: 558 EHIIQXYHYL---KCSDTVV 608
+ I+ Y + K SDTVV
Sbjct: 57 DRIMNTYSVVPSPKVSDTVV 76
Score = 43.6 bits (98), Expect = 5e-06
Identities = 21/46 (45%), Positives = 22/46 (47%)
Frame = +1
Query: 427 RKEAEXCDCLQGFQXXXXXXXXXXXXMAPFXSPKSENKXPDRIMNT 564
RKE E CDCLQGFQ M K + PDRIMNT
Sbjct: 17 RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNT 62
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 26.6 bits (56), Expect = 0.63
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWE 132
MRE + + GQ G QIG W+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 26.2 bits (55), Expect = 0.83
Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +1
Query: 226 ASGGKYV-PRASSSTWSPAPWTL 291
A GG YV A++++W+PA W L
Sbjct: 2698 AVGGAYVGASAANNSWNPAKWEL 2720
>AF020851-1|AAC31864.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 23.8 bits (49), Expect = 4.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 206 SMYTTMKPPAASTCPAHPRRLGARHH 283
S+YTT+ P+AST H +RHH
Sbjct: 13 SLYTTVSEPSASTKHRH----HSRHH 34
>AF020850-1|AAC31863.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 23.8 bits (49), Expect = 4.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 206 SMYTTMKPPAASTCPAHPRRLGARHH 283
S+YTT+ P+AST H +RHH
Sbjct: 13 SLYTTVSEPSASTKHRH----HSRHH 34
>AF020849-1|AAC31862.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 23.8 bits (49), Expect = 4.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 206 SMYTTMKPPAASTCPAHPRRLGARHH 283
S+YTT+ P+AST H +RHH
Sbjct: 13 SLYTTVSEPSASTKHRH----HSRHH 34
>AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein.
Length = 259
Score = 23.0 bits (47), Expect = 7.7
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -2
Query: 415 KTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKG 302
K T + + CPL ++ DC +L KI KG
Sbjct: 195 KATGTKAHTAKYCPLKPVITPEDCLAMELRRHKIHRKG 232
>AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein.
Length = 260
Score = 23.0 bits (47), Expect = 7.7
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -2
Query: 415 KTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKG 302
K T + + CPL ++ DC +L KI KG
Sbjct: 196 KATGTKAHTAKYCPLKPVITPEDCLAMELRRHKIHRKG 233
>AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P450
reductase protein.
Length = 679
Score = 23.0 bits (47), Expect = 7.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 121 KFWEIISDEHGIDPTG 168
KFW + D GI+ TG
Sbjct: 225 KFWPTVCDYFGIESTG 240
>AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14D2
protein.
Length = 372
Score = 23.0 bits (47), Expect = 7.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 339 FGQSGAGNNWAKGHYTEGAELVDSVLD 419
FG G + G YT +E +D VLD
Sbjct: 343 FGLEQCGTDGVPGVYTRMSEYMDWVLD 369
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,782
Number of Sequences: 2352
Number of extensions: 11971
Number of successful extensions: 60
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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