Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1226
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 151 3e-37
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 134 6e-32
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 134 6e-32
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 134 6e-32
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 132 1e-31
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 132 1e-31
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 97 9e-21
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 97 9e-21
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 71 5e-13
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 69 2e-12
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 69 2e-12
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 69 2e-12
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 69 2e-12
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 68 5e-12
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 67 8e-12
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 67 8e-12
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 65 3e-11
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 65 3e-11
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 65 3e-11
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 65 3e-11
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 65 4e-11
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 62 3e-10
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 58 5e-09
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 55 3e-08
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 55 3e-08
Z29117-12|CAE17731.1| 179|Caenorhabditis elegans Hypothetical p... 30 1.5
AF357877-1|AAK27715.1| 835|Caenorhabditis elegans receptor-medi... 27 7.9
AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor med... 27 7.9
AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor med... 27 7.9
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 151 bits (367), Expect = 3e-37
Identities = 83/166 (50%), Positives = 87/166 (52%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 247 PRASSSTWSPAPWTLSALDLXXXXXXXXXXXXXXXXXXXXGPRDTTRRVLSSSIQF*TSX 426
PRA P +
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 427 RKEAEXCDCLQGFQXXXXXXXXXXXXMAPFXSPKSENKXPDRIMNT 564
RKEAE CDCLQGFQ M K + PDRIM T
Sbjct: 121 RKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMT 166
Score = 130 bits (315), Expect = 6e-31
Identities = 72/120 (60%), Positives = 81/120 (67%), Gaps = 3/120 (2%)
Frame = +3
Query: 258 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVRSKGS 437
LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV K +
Sbjct: 65 LVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124
Query: 438 GXV*LPPGIPTDTLARXRHXFRYGTLLISKIREQVP*QNNEHIIQXYHYL---KCSDTVV 608
G GTLLISKIRE+ P + I+ + + K SDTVV
Sbjct: 125 ESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYP----DRIMMTFSVVPSPKVSDTVV 180
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 134 bits (323), Expect = 6e-32
Identities = 78/125 (62%), Positives = 88/125 (70%), Gaps = 5/125 (4%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV- 422
PR +LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 423 RSKGSGXV*LPPGIPTDTLARXRHXFRYGTLLISKIREQVP*QNNEHIIQXYHYL---KC 593
R + G L T +L GTLLISKIRE+ P + I+ + + K
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGT-GSGMGTLLISKIREEFP----DRIMSSFSVVPSPKV 175
Query: 594 SDTVV 608
SDTVV
Sbjct: 176 SDTVV 180
Score = 120 bits (290), Expect = 6e-28
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 134 bits (323), Expect = 6e-32
Identities = 78/125 (62%), Positives = 88/125 (70%), Gaps = 5/125 (4%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD-V 422
PR +LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLD V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 423 RSKGSGXV*LPPGIPTDTLARXRHXFRYGTLLISKIREQVP*QNNEHIIQXYHYL---KC 593
R + G L T +L GTLLISKIRE+ P + I+ + + K
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGT-GSGMGTLLISKIREEYP----DRIMSSFSVVPSPKV 175
Query: 594 SDTVV 608
SDTVV
Sbjct: 176 SDTVV 180
Score = 128 bits (308), Expect = 4e-30
Identities = 55/63 (87%), Positives = 59/63 (93%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 134 bits (323), Expect = 6e-32
Identities = 78/125 (62%), Positives = 88/125 (70%), Gaps = 5/125 (4%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV- 422
PR +LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 423 RSKGSGXV*LPPGIPTDTLARXRHXFRYGTLLISKIREQVP*QNNEHIIQXYHYL---KC 593
R + G L T +L GTLLISKIRE+ P + I+ + + K
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGT-GSGMGTLLISKIREEYP----DRIMSSFSVVPSPKV 175
Query: 594 SDTVV 608
SDTVV
Sbjct: 176 SDTVV 180
Score = 119 bits (287), Expect = 1e-27
Identities = 50/63 (79%), Positives = 58/63 (92%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 132 bits (320), Expect = 1e-31
Identities = 74/124 (59%), Positives = 84/124 (67%), Gaps = 4/124 (3%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVR 425
PR +LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 426 SKGSGXV*LPPGIPTDTLARXRHXFRYGTLLISKIREQVP*QNNEHIIQXYHYL---KCS 596
K + G GTLLISKIRE+ P + I+ + + K S
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP----DRIMNTFSVVPSPKVS 176
Query: 597 DTVV 608
DTVV
Sbjct: 177 DTVV 180
Score = 125 bits (302), Expect = 2e-29
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 132 bits (320), Expect = 1e-31
Identities = 74/124 (59%), Positives = 84/124 (67%), Gaps = 4/124 (3%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVR 425
PR +LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 426 SKGSGXV*LPPGIPTDTLARXRHXFRYGTLLISKIREQVP*QNNEHIIQXYHYL---KCS 596
K + G GTLLISKIRE+ P + I+ + + K S
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP----DRIMNTFSVVPSPKVS 176
Query: 597 DTVV 608
DTVV
Sbjct: 177 DTVV 180
Score = 125 bits (302), Expect = 2e-29
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 97.1 bits (231), Expect = 9e-21
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 81.0 bits (191), Expect = 6e-16
Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVR 425
PR ILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 426 SKGSGXV*LPPGIPTDTLARXRHXFRYGTLLISKIREQVP*QNNEHIIQXYHYLKCSDTV 605
+ + G G+LLISK+RE+ K SDTV
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYS-DKTLSTCSIIPSAKVSDTV 179
Query: 606 V 608
V
Sbjct: 180 V 180
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 97.1 bits (231), Expect = 9e-21
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 81.0 bits (191), Expect = 6e-16
Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVR 425
PR ILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 426 SKGSGXV*LPPGIPTDTLARXRHXFRYGTLLISKIREQVP*QNNEHIIQXYHYLKCSDTV 605
+ + G G+LLISK+RE+ K SDTV
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYS-DKTLSTCSIIPSAKVSDTV 179
Query: 606 V 608
V
Sbjct: 180 V 180
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 71.3 bits (167), Expect = 5e-13
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
PR I VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLD 123
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG-AYHGDSDLQLERINVYYNEASGGKYV 246
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 247 PRA 255
PRA
Sbjct: 66 PRA 68
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
PR I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Score = 57.6 bits (133), Expect = 6e-09
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 247 PRA 255
PR+
Sbjct: 61 PRS 63
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
PR I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 247 PRA 255
PR+
Sbjct: 61 PRS 63
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
PR I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 247 PRA 255
PR+
Sbjct: 61 PRS 63
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
PR I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Score = 57.6 bits (133), Expect = 6e-09
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 247 PRA 255
PR+
Sbjct: 61 PRS 63
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
PR I VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 63 PRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Score = 58.4 bits (135), Expect = 4e-09
Identities = 30/65 (46%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 240
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 67.3 bits (157), Expect = 8e-12
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
PR I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Score = 55.2 bits (127), Expect = 3e-08
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 247 PRA 255
PR+
Sbjct: 61 PRS 63
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 67.3 bits (157), Expect = 8e-12
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
PR I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Score = 55.2 bits (127), Expect = 3e-08
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 247 PRA 255
PR+
Sbjct: 61 PRS 63
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 66.1 bits (154), Expect = 2e-11
Identities = 27/58 (46%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
PR I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Score = 48.0 bits (109), Expect = 5e-06
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 247 PRA 255
PR+
Sbjct: 60 PRS 62
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 65.3 bits (152), Expect = 3e-11
Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
PR ++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 63 PRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Score = 55.2 bits (127), Expect = 3e-08
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 65.3 bits (152), Expect = 3e-11
Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
PR ++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 62 PRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 119
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 244 VPRA 255
VPRA
Sbjct: 61 VPRA 64
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 65.3 bits (152), Expect = 3e-11
Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
PR ++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 63 PRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Score = 55.2 bits (127), Expect = 3e-08
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 65.3 bits (152), Expect = 3e-11
Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
PR ++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 63 PRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Score = 55.2 bits (127), Expect = 3e-08
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 64.9 bits (151), Expect = 4e-11
Identities = 27/58 (46%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
PR I+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+D
Sbjct: 68 PRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMD 125
Score = 60.5 bits (140), Expect = 9e-10
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 61 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 234
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L + + N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 235 GKYVPRASSSTWSPAP 282
GK+VPRA P P
Sbjct: 64 GKHVPRAIMVDLEPTP 79
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 240
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 241 YVPR 252
+VPR
Sbjct: 67 HVPR 70
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +3
Query: 249 PRIL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
PR L VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 69 PRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 126
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +3
Query: 249 PRIL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
PR L VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 41 PRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 98
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +1
Query: 145 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPR 252
EHGI P G YH + D + E IN ++ E +GGK+VPR
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPR 42
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 55.2 bits (127), Expect = 3e-08
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVL 416
PR +LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++
Sbjct: 63 PRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIM 121
Query: 417 DVRSKGSGXV*LPPGIPTDTLARXRHXFRYGTLLISKIREQVP*QNNEHIIQXYHYLKCS 596
D+ + + GI G+LL+ ++RE P + +IQ Y S
Sbjct: 122 DIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFP----KKVIQTYSVFANS 177
Query: 597 DT 602
DT
Sbjct: 178 DT 179
Score = 50.8 bits (116), Expect = 7e-07
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = +1
Query: 76 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 255
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 55.2 bits (127), Expect = 3e-08
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVL 416
PR +LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++
Sbjct: 63 PRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIM 121
Query: 417 DVRSKGSGXV*LPPGIPTDTLARXRHXFRYGTLLISKIREQVP*QNNEHIIQXYHYLKCS 596
D+ + + GI G+LL+ ++RE P + +IQ Y S
Sbjct: 122 DIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFP----KKVIQTYSVFANS 177
Query: 597 DT 602
DT
Sbjct: 178 DT 179
Score = 50.8 bits (116), Expect = 7e-07
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = +1
Query: 76 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 255
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
>Z29117-12|CAE17731.1| 179|Caenorhabditis elegans Hypothetical
protein C48B4.13 protein.
Length = 179
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -2
Query: 457 GGNHTIPLPFXRTSKTESTSSAP 389
GG T P+PF T+KTE+++ AP
Sbjct: 81 GGMVTSPVPFTTTAKTENSAEAP 103
>AF357877-1|AAK27715.1| 835|Caenorhabditis elegans
receptor-mediated endocytosis 1isoform II protein.
Length = 835
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 341 EDEVVRTEDLSERSRADRVHGAGLQVDEDARGTYLPPEA 225
E+ TEDLSERS ++ G V+E +P E+
Sbjct: 125 EELNAETEDLSERSEVEKDEDLGRVVEEHKEPAQVPVES 163
>AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform a protein.
Length = 786
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 341 EDEVVRTEDLSERSRADRVHGAGLQVDEDARGTYLPPEA 225
E+ TEDLSERS ++ G V+E +P E+
Sbjct: 76 EELNAETEDLSERSEVEKDEDLGRVVEEHKEPAQVPVES 114
>AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform b protein.
Length = 835
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 341 EDEVVRTEDLSERSRADRVHGAGLQVDEDARGTYLPPEA 225
E+ TEDLSERS ++ G V+E +P E+
Sbjct: 125 EELNAETEDLSERSEVEKDEDLGRVVEEHKEPAQVPVES 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,087,780
Number of Sequences: 27780
Number of extensions: 258166
Number of successful extensions: 834
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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