Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1221
         (648 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0169 - 1396657-1396710,1396801-1396843,1397440-1397904,139...    29   3.2  
02_04_0621 - 24502383-24502476,24502532-24504015,24504125-245041...    29   4.2  

>08_01_0169 -
           1396657-1396710,1396801-1396843,1397440-1397904,
           1397999-1399395
          Length = 652

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 17/42 (40%), Positives = 27/42 (64%)
 Frame = +1

Query: 325 PAHFESISNNSPTFSLTSNNQELDDLELSKSIYSTCIDNKMN 450
           PAHF ++S N PTF+ +S+NQ + ++E + S+    ID   N
Sbjct: 25  PAHFAALSFNYPTFA-SSHNQYI-EIEGNASVSVGYIDISAN 64


>02_04_0621 -
           24502383-24502476,24502532-24504015,24504125-24504177,
           24504871-24504984,24505068-24505202,24505960-24506055,
           24506692-24506827
          Length = 703

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = +2

Query: 125 KLDEKYHDNKMNAKDHNNECGNDVTPQL 208
           K +E YH+ ++NAK  ++E GN+ TPQL
Sbjct: 106 KNEEIYHE-QVNAKASHSEHGNNDTPQL 132


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,173,891
Number of Sequences: 37544
Number of extensions: 190831
Number of successful extensions: 488
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)