Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1218
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    33   0.010
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    33   0.010
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    27   0.68 
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    27   0.68 
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    26   1.2  
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    26   1.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   1.6  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         25   1.6  
AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione transf...    24   3.6  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   8.3  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   8.3  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   8.3  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 32.7 bits (71), Expect = 0.010
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +1

Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHNAEE 396
           Y+ ++C+ +   G+C +G  C F+H+  +
Sbjct: 176 YQPDICKDYKETGYCGFGDSCKFLHDRSD 204



 Score = 30.7 bits (66), Expect = 0.042
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = +2

Query: 197 YKTELCRPFEEAGVCKYGDNANLLTASANY 286
           Y+ ++C+ ++E G C +GD+   L   ++Y
Sbjct: 176 YQPDICKDYKETGYCGFGDSCKFLHDRSDY 205


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 32.7 bits (71), Expect = 0.010
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +1

Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHNAEE 396
           Y+ ++C+ +   G+C +G  C F+H+  +
Sbjct: 176 YQPDICKDYKETGYCGFGDSCKFLHDRSD 204



 Score = 30.7 bits (66), Expect = 0.042
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = +2

Query: 197 YKTELCRPFEEAGVCKYGDNANLLTASANY 286
           Y+ ++C+ ++E G C +GD+   L   ++Y
Sbjct: 176 YQPDICKDYKETGYCGFGDSCKFLHDRSDY 205


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 154 HHQ*TGSSATSHKSLQDRALPTV*RSGGL 240
           HH   GS ATSH ++Q  A PT+   G +
Sbjct: 24  HH---GSIATSHSTIQHHAAPTIQHVGSV 49


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 154 HHQ*TGSSATSHKSLQDRALPTV*RSGGL 240
           HH   GS ATSH ++Q  A PT+   G +
Sbjct: 24  HH---GSIATSHSTIQHHAAPTIQHVGSV 49


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 169 GSSATSHKSLQDRALPTV*RSGGL 240
           GS ATSH S+Q  A P +   G +
Sbjct: 26  GSIATSHSSIQHHAAPAIHHVGSI 49


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 154 HHQ*TGSSATSHKSLQDRALPTV*RSGGL 240
           HH   GS ATSH S+Q  A P +   G +
Sbjct: 24  HH---GSIATSHSSIQHHAAPAIHHVGSV 49


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -2

Query: 527 RVGVNGDAGERGDRDPSLIYDAIDPPDESDANEPPGDDGS 408
           R G+ GD GERG         A   P E      PG+DG+
Sbjct: 584 RPGMKGDKGERGYAGEPGRPGASGVPGERGYPGMPGEDGT 623


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 513 WRCGRAWRSRPVAHIRRHRSAR 448
           WRC RA  SRP+   R  R  R
Sbjct: 7   WRCARASPSRPILTTRGRRWPR 28


>AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione
           transferase o1 protein.
          Length = 248

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 337 HSVGFCPYGPRCHFVHNAEE 396
           +S+ FCPY  R H + +A++
Sbjct: 25  YSMRFCPYAQRVHLMLDAKK 44


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
 Frame = -2

Query: 515 NGDAGE---RGDRDPSLIYDAIDPPDESDANEPPGDDGSLRLAS 393
           NGD G     G+ DPS+     D P E      P +D SL   S
Sbjct: 103 NGDGGRPAYSGNSDPSMDQVKTDKPRELYIPPLPTEDESLIFGS 146


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 265 AHGVRELRNLQRHPKYKTELCRT 333
           +HG R L + QR   YK EL  T
Sbjct: 233 SHGDRLLEDRQRFDNYKRELKET 255


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 521 GVNGDAGERGDR 486
           GV G+ GE+GDR
Sbjct: 239 GVKGEPGEKGDR 250


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,692
Number of Sequences: 2352
Number of extensions: 13419
Number of successful extensions: 82
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)