Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1213
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   3.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    20   9.4  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    20   9.4  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 361 NVCQSFLSDKRYVVKLKIN 417
           ++CQ   S K+ +VK+KI+
Sbjct: 312 DLCQEANSTKKLIVKIKID 330


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 255 CVRFKDYFPMALAEP 211
           C++ ++ F M +AEP
Sbjct: 440 CIKNREGFEMVIAEP 454


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 32  LHKLTMNFAKILSFVFALVLAL 97
           LHK  +  AK L+ VFA  L L
Sbjct: 84  LHKTLVRVAKSLNQVFAPQLLL 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,242
Number of Sequences: 336
Number of extensions: 1508
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)