Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1211
         (598 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CC0ED Cluster: saccharopine dehydrogenase famil...    35   1.3  
UniRef50_Q554N7 Cluster: EGF-like domain-containing protein; n=2...    34   2.9  
UniRef50_UPI000065E29B Cluster: Protein Dok-7 (Downstream of tyr...    33   3.9  
UniRef50_Q89K70 Cluster: Bll5041 protein; n=2; Bradyrhizobiaceae...    33   6.7  
UniRef50_A1VLJ8 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  
UniRef50_A2D7I6 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  
UniRef50_Q9WXI8 Cluster: Alpha-1,2-mannosidase precursor; n=1; M...    32   8.9  
UniRef50_P09396 Cluster: TGB1 helicase; n=13; Potato virus X|Rep...    32   8.9  

>UniRef50_UPI00006CC0ED Cluster: saccharopine dehydrogenase family
            protein; n=1; Tetrahymena thermophila SB210|Rep:
            saccharopine dehydrogenase family protein - Tetrahymena
            thermophila SB210
          Length = 1353

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
 Frame = +1

Query: 229  SQDKAPACIAGPTTQNDFQLLDEEY-IRKN--FKLPQRALYLDPYRRPLITFPMTQE--D 393
            SQ      I  P   N  Q  ++ Y +++N   K P R  Y+      +  F        
Sbjct: 1064 SQSARKRVIKTPNAVN--QQCEQNYNVKENQGSKNPSRCEYIQSEPNEIFCFKRQSFPLS 1121

Query: 394  CKHFNLARKYKINQQILDGYLDPGESISAPSVFPYMKTRQKSKAKLMMMKEIISYYSF 567
            CK+ N+ ++   NQ IL+  L PG+ + +P       + ++++A    ++ + + Y +
Sbjct: 1122 CKNSNIQQQQGFNQLILNQLLQPGKQVQSPFQVQQQMSSKRNRAVSQFIQNVSNEYGY 1179


>UniRef50_Q554N7 Cluster: EGF-like domain-containing protein; n=2;
            Dictyostelium discoideum|Rep: EGF-like domain-containing
            protein - Dictyostelium discoideum AX4
          Length = 1918

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +2

Query: 110  GDSFQFCK-MTSCCTCEGHHSGAKSSLPLV 196
            G SF  C   T  CTC+G   GA  SLPL+
Sbjct: 1256 GSSFGSCNNQTGVCTCDGSQQGADCSLPLI 1285


>UniRef50_UPI000065E29B Cluster: Protein Dok-7 (Downstream of
           tyrosine kinase 7).; n=1; Takifugu rubripes|Rep: Protein
           Dok-7 (Downstream of tyrosine kinase 7). - Takifugu
           rubripes
          Length = 233

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
 Frame = +2

Query: 164 HSGAKSSLPLVCLVP-----RDGASSEARTKPRPA*LGPQLKMISSCSTRSTSGKTLSC 325
           H+  K++L  +CL+       D AS+E R     + L  +L M+S CS  S++  T SC
Sbjct: 55  HANVKTTLSPLCLLGPADLGADPASAEERICQEASDLEKRLSMLSECSLASSTASTYSC 113


>UniRef50_Q89K70 Cluster: Bll5041 protein; n=2;
           Bradyrhizobiaceae|Rep: Bll5041 protein - Bradyrhizobium
           japonicum
          Length = 603

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = +1

Query: 199 PGSSRWSIFGSQDKAPACIAGPTTQNDFQLLDE 297
           PG + WS+FG+   AP  +A PT Q++ QLLD+
Sbjct: 85  PGGAMWSLFGAM-VAPG-VAVPTAQHEQQLLDK 115


>UniRef50_A1VLJ8 Cluster: Putative uncharacterized protein; n=1;
           Polaromonas naphthalenivorans CJ2|Rep: Putative
           uncharacterized protein - Polaromonas naphthalenivorans
           (strain CJ2)
          Length = 1991

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 23/68 (33%), Positives = 34/68 (50%)
 Frame = -2

Query: 372 GYKGTSIRVQIQRPLWQLKVFPDVLLVEQLEIILSCGPSYAGRGFVLASEDAPSRGTRQT 193
           GY      V + R L    +  +   VE LE+++SC P++A RG  L  +   +  TR+ 
Sbjct: 38  GYAAIQNAVPVVRALRLTNLMAET--VENLEVVVSCSPAFA-RGLKLRFDKLAAGETRRI 94

Query: 192 SGRLDLAP 169
           S  LDL P
Sbjct: 95  S-PLDLQP 101


>UniRef50_A2D7I6 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 2791

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 471  NICAERFPIYENEAEKQSEADDDERNNIILQLSDYVYK 584
            N  A++  I   E     E D+DE +NI+++  DY+YK
Sbjct: 1327 NNLAKQKKIISREINLNEEEDEDESHNIVIRNIDYIYK 1364


>UniRef50_Q9WXI8 Cluster: Alpha-1,2-mannosidase precursor; n=1;
           Microbacterium sp. M-90|Rep: Alpha-1,2-mannosidase
           precursor - Microbacterium sp. M-90
          Length = 1976

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +1

Query: 178 VESAAGLPGSSRWSIFGSQDKAPACIAGPTTQND 279
           V+  +G PG +R  ++G+ D+APA  AG TT  D
Sbjct: 571 VDGGSGWPGRTRMFVYGTFDRAPA-TAGATTVGD 603


>UniRef50_P09396 Cluster: TGB1 helicase; n=13; Potato virus X|Rep:
           TGB1 helicase - Potato virus X (PVX)
          Length = 226

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = +1

Query: 259 GPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKINQQ 438
           GP  + +F +LDE  +    +   +AL+ DPY+ P  +         HF L   +++ ++
Sbjct: 71  GPIPEGNFAILDEYTLDNTTRNSYQALFADPYQAPEFSLE------PHFYLETSFRVPRK 124

Query: 439 ILD 447
           + D
Sbjct: 125 VAD 127


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,234,651
Number of Sequences: 1657284
Number of extensions: 12618791
Number of successful extensions: 35997
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35972
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)