BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1211
(598 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00649-1|CAA68674.1| 1032|Homo sapiens CR2 receptor protein. 31 2.3
M26016-1|AAB04638.1| 1033|Homo sapiens CR2 protein. 31 2.3
M26004-1|AAA35786.1| 1033|Homo sapiens CR2 protein. 31 2.3
J03565-1|AAA35784.1| 1087|Homo sapiens CR2 protein. 31 2.3
EF064746-1|ABK41929.1| 1092|Homo sapiens complement component (3... 31 2.3
BC090937-1|AAH90937.1| 1033|Homo sapiens complement component (3... 31 2.3
AL691452-9|CAI16729.1| 1092|Homo sapiens complement component (3... 31 2.3
AL691452-8|CAI16731.1| 971|Homo sapiens complement component (3... 31 2.3
AL691452-7|CAI16730.1| 1033|Homo sapiens complement component (3... 31 2.3
AL391597-7|CAH72950.1| 1092|Homo sapiens complement component (3... 31 2.3
AL391597-6|CAH72951.1| 971|Homo sapiens complement component (3... 31 2.3
AL391597-5|CAH72949.1| 1033|Homo sapiens complement component (3... 31 2.3
AK223627-1|BAD97347.1| 1092|Homo sapiens complement component (3... 31 2.3
>Y00649-1|CAA68674.1| 1032|Homo sapiens CR2 receptor protein.
Length = 1032
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 250 CIAGPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKI 429
C GP +F L+ E IR +R + P PL + C H ++A YKI
Sbjct: 555 CNPGPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKI 612
Query: 430 N 432
+
Sbjct: 613 S 613
>M26016-1|AAB04638.1| 1033|Homo sapiens CR2 protein.
Length = 1033
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 250 CIAGPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKI 429
C GP +F L+ E IR +R + P PL + C H ++A YKI
Sbjct: 556 CNPGPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKI 613
Query: 430 N 432
+
Sbjct: 614 S 614
>M26004-1|AAA35786.1| 1033|Homo sapiens CR2 protein.
Length = 1033
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 250 CIAGPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKI 429
C GP +F L+ E IR +R + P PL + C H ++A YKI
Sbjct: 556 CNPGPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKI 613
Query: 430 N 432
+
Sbjct: 614 S 614
>J03565-1|AAA35784.1| 1087|Homo sapiens CR2 protein.
Length = 1087
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 250 CIAGPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKI 429
C GP +F L+ E IR +R + P PL + C H ++A YKI
Sbjct: 556 CNPGPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKI 613
Query: 430 N 432
+
Sbjct: 614 S 614
>EF064746-1|ABK41929.1| 1092|Homo sapiens complement component
(3d/Epstein Barr virus) receptor 2 protein.
Length = 1092
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 250 CIAGPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKI 429
C GP +F L+ E IR +R + P PL + C H ++A YKI
Sbjct: 556 CNPGPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKI 613
Query: 430 N 432
+
Sbjct: 614 S 614
>BC090937-1|AAH90937.1| 1033|Homo sapiens complement component
(3d/Epstein Barr virus) receptor 2 protein.
Length = 1033
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 250 CIAGPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKI 429
C GP +F L+ E IR +R + P PL + C H ++A YKI
Sbjct: 556 CNPGPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKI 613
Query: 430 N 432
+
Sbjct: 614 S 614
>AL691452-9|CAI16729.1| 1092|Homo sapiens complement component
(3d/Epstein Barr virus) receptor 2 protein.
Length = 1092
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 250 CIAGPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKI 429
C GP +F L+ E IR +R + P PL + C H ++A YKI
Sbjct: 556 CNPGPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKI 613
Query: 430 N 432
+
Sbjct: 614 S 614
>AL691452-8|CAI16731.1| 971|Homo sapiens complement component
(3d/Epstein Barr virus) receptor 2 protein.
Length = 971
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 250 CIAGPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKI 429
C GP +F L+ E IR +R + P PL + C H ++A YKI
Sbjct: 556 CNPGPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKI 613
Query: 430 N 432
+
Sbjct: 614 S 614
>AL691452-7|CAI16730.1| 1033|Homo sapiens complement component
(3d/Epstein Barr virus) receptor 2 protein.
Length = 1033
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 250 CIAGPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKI 429
C GP +F L+ E IR +R + P PL + C H ++A YKI
Sbjct: 556 CNPGPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKI 613
Query: 430 N 432
+
Sbjct: 614 S 614
>AL391597-7|CAH72950.1| 1092|Homo sapiens complement component
(3d/Epstein Barr virus) receptor 2 protein.
Length = 1092
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 250 CIAGPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKI 429
C GP +F L+ E IR +R + P PL + C H ++A YKI
Sbjct: 556 CNPGPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKI 613
Query: 430 N 432
+
Sbjct: 614 S 614
>AL391597-6|CAH72951.1| 971|Homo sapiens complement component
(3d/Epstein Barr virus) receptor 2 protein.
Length = 971
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 250 CIAGPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKI 429
C GP +F L+ E IR +R + P PL + C H ++A YKI
Sbjct: 556 CNPGPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKI 613
Query: 430 N 432
+
Sbjct: 614 S 614
>AL391597-5|CAH72949.1| 1033|Homo sapiens complement component
(3d/Epstein Barr virus) receptor 2 protein.
Length = 1033
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 250 CIAGPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKI 429
C GP +F L+ E IR +R + P PL + C H ++A YKI
Sbjct: 556 CNPGPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKI 613
Query: 430 N 432
+
Sbjct: 614 S 614
>AK223627-1|BAD97347.1| 1092|Homo sapiens complement component
(3d/Epstein Barr virus) receptor 2 isoform 1 variant
protein.
Length = 1092
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 250 CIAGPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKI 429
C GP +F L+ E IR +R + P PL + C H ++A YKI
Sbjct: 556 CNPGPERGVEFSLIGESTIRCTSNDQERGTWSGP--APLCKLSLLAVQCSHVHIANGYKI 613
Query: 430 N 432
+
Sbjct: 614 S 614
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,052,313
Number of Sequences: 237096
Number of extensions: 2017639
Number of successful extensions: 8610
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8610
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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