Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1210
         (399 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    24   0.48 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   0.48 

>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 24.2 bits (50), Expect = 0.48
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +2

Query: 104 YXEKNPCIQPPLVCPKNTEHRARHAGKCACCPAC 205
           + E+ PCI     C KNT  R    G C    +C
Sbjct: 84  FHEREPCIAGSAPCRKNT-GRCAFDGICCSQDSC 116


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.2 bits (50), Expect = 0.48
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -2

Query: 212 KLHKRDNKHTFQRVWRDAQCS*GKQVVAVCMDFFXSSLY 96
           KLHK DNK     +W+  + +   Q+   C  FF   L+
Sbjct: 110 KLHKLDNKLKHMLIWKSYKRT---QIFITCELFFVILLW 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,311
Number of Sequences: 336
Number of extensions: 1961
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)