Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1210
         (399 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92833-7|CAB07381.1|  825|Caenorhabditis elegans Hypothetical pr...    31   0.30 
Z92833-6|CAB07380.1|  823|Caenorhabditis elegans Hypothetical pr...    31   0.30 
AL023842-9|CAA19521.1|  825|Caenorhabditis elegans Hypothetical ...    31   0.30 
AL023842-8|CAA19520.1|  823|Caenorhabditis elegans Hypothetical ...    31   0.30 
Z95559-9|CAI46625.1|  510|Caenorhabditis elegans Hypothetical pr...    30   0.70 
Z68296-6|CAE17754.1|  195|Caenorhabditis elegans Hypothetical pr...    30   0.70 
U00064-1|AAD31935.1|  845|Caenorhabditis elegans Hypothetical pr...    27   3.7  
Z81544-9|CAI79252.1|  231|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z92804-2|CAB07253.2|  321|Caenorhabditis elegans Hypothetical pr...    26   8.7  
AL032656-3|CAD12890.1|  731|Caenorhabditis elegans Hypothetical ...    26   8.7  
AF416781-1|AAL38510.1|  731|Caenorhabditis elegans PH domain pro...    26   8.7  
AF324505-1|AAL49495.1|  731|Caenorhabditis elegans CED-12 protein.     26   8.7  
AC024785-4|AAF60602.3|  466|Caenorhabditis elegans C-type lectin...    26   8.7  

>Z92833-7|CAB07381.1|  825|Caenorhabditis elegans Hypothetical
           protein F38A6.3b protein.
          Length = 825

 Score = 31.1 bits (67), Expect = 0.30
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -2

Query: 311 LTLLMHLRGSLHTAEGVSPVPSNKSCKLHLXQVKLHKRDNKHTFQR 174
           +TL+ HL+ + H  E     P++ S KLHL  +K+     ++  +R
Sbjct: 71  VTLIAHLKVARHYGEVAPITPTSASLKLHLFTIKMEDNRKRNMERR 116


>Z92833-6|CAB07380.1|  823|Caenorhabditis elegans Hypothetical
           protein F38A6.3a protein.
          Length = 823

 Score = 31.1 bits (67), Expect = 0.30
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -2

Query: 311 LTLLMHLRGSLHTAEGVSPVPSNKSCKLHLXQVKLHKRDNKHTFQR 174
           +TL+ HL+ + H  E     P++ S KLHL  +K+     ++  +R
Sbjct: 71  VTLIAHLKVARHYGEVAPITPTSASLKLHLFTIKMEDNRKRNMERR 116


>AL023842-9|CAA19521.1|  825|Caenorhabditis elegans Hypothetical
           protein F38A6.3b protein.
          Length = 825

 Score = 31.1 bits (67), Expect = 0.30
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -2

Query: 311 LTLLMHLRGSLHTAEGVSPVPSNKSCKLHLXQVKLHKRDNKHTFQR 174
           +TL+ HL+ + H  E     P++ S KLHL  +K+     ++  +R
Sbjct: 71  VTLIAHLKVARHYGEVAPITPTSASLKLHLFTIKMEDNRKRNMERR 116


>AL023842-8|CAA19520.1|  823|Caenorhabditis elegans Hypothetical
           protein F38A6.3a protein.
          Length = 823

 Score = 31.1 bits (67), Expect = 0.30
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -2

Query: 311 LTLLMHLRGSLHTAEGVSPVPSNKSCKLHLXQVKLHKRDNKHTFQR 174
           +TL+ HL+ + H  E     P++ S KLHL  +K+     ++  +R
Sbjct: 71  VTLIAHLKVARHYGEVAPITPTSASLKLHLFTIKMEDNRKRNMERR 116


>Z95559-9|CAI46625.1|  510|Caenorhabditis elegans Hypothetical
           protein Y41E3.18 protein.
          Length = 510

 Score = 29.9 bits (64), Expect = 0.70
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 149 KNTEHRARHAGKCACCPACVTLLGEGA 229
           K T HR +H    ACCP C  ++   A
Sbjct: 147 KGTWHRVKHVVFVACCPPCCCIIQRSA 173


>Z68296-6|CAE17754.1|  195|Caenorhabditis elegans Hypothetical
           protein C46C2.6a protein.
          Length = 195

 Score = 29.9 bits (64), Expect = 0.70
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +2

Query: 143 CPKNTEHRARHAGKCACCPACVTLLGEGATC-KIYSXEQAK 262
           CP + +   +H+G+CA   AC+     G  C K++S +  K
Sbjct: 60  CPSDYDFIRQHSGRCADGTACIPDSSFGEPCIKLFSYQMTK 100


>U00064-1|AAD31935.1|  845|Caenorhabditis elegans Hypothetical
           protein ZC155.3 protein.
          Length = 845

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +1

Query: 127 TATTCLP*EH*ASRQTRWKVCLLSRLCNF--TWXRCNLQDLFXGTGE 261
           T+TTC+     A  Q  W  C + +LC    TW + +  +   G+ +
Sbjct: 486 TSTTCVQTHDSARDQVMWTTCGIWKLCQMCRTWIKASRPNEIVGSND 532


>Z81544-9|CAI79252.1|  231|Caenorhabditis elegans Hypothetical
           protein F49C5.10 protein.
          Length = 231

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 104 YXEKNPCIQPPLVCPKNTEHRARHAGKCAC 193
           Y   N    PPL+C + T ++ R+    AC
Sbjct: 38  YFNFNKIWNPPLICNRGTNYKCRNRDCTAC 67


>Z92804-2|CAB07253.2|  321|Caenorhabditis elegans Hypothetical
           protein K05D4.3 protein.
          Length = 321

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -2

Query: 392 IIFRTGRDRSIASXYFPXNEIDYTXLVLTLLMH 294
           ++FR+ R R  ++  FP  +  Y+ +V T ++H
Sbjct: 47  VVFRSNRQRDRSTPIFPIIKHFYSTVVRTYILH 79


>AL032656-3|CAD12890.1|  731|Caenorhabditis elegans Hypothetical
           protein Y106G6E.5 protein.
          Length = 731

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -2

Query: 188 HTFQRVWRDAQCS*GKQVVAVCMDFFXSSLYHIPKHRTL 72
           H F R WR+ Q   G+     C+      L H+ K R +
Sbjct: 454 HLFHRTWREMQAKGGEMEKVACV--VLEQLRHVLKRREI 490


>AF416781-1|AAL38510.1|  731|Caenorhabditis elegans PH domain
           protein CED-12 protein.
          Length = 731

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -2

Query: 188 HTFQRVWRDAQCS*GKQVVAVCMDFFXSSLYHIPKHRTL 72
           H F R WR+ Q   G+     C+      L H+ K R +
Sbjct: 454 HLFHRTWREMQAKGGEMEKVACV--VLEQLRHVLKRREI 490


>AF324505-1|AAL49495.1|  731|Caenorhabditis elegans CED-12 protein.
          Length = 731

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -2

Query: 188 HTFQRVWRDAQCS*GKQVVAVCMDFFXSSLYHIPKHRTL 72
           H F R WR+ Q   G+     C+      L H+ K R +
Sbjct: 454 HLFHRTWREMQAKGGEMEKVACV--VLEQLRHVLKRREI 490


>AC024785-4|AAF60602.3|  466|Caenorhabditis elegans C-type lectin
           protein 72 protein.
          Length = 466

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 24/84 (28%), Positives = 34/84 (40%)
 Frame = +2

Query: 116 NPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKIYSXEQAKPPPLCVRSLSN 295
           +P +QP  V PK T      A    C      L G+      YS + A    L   S S 
Sbjct: 146 DPTVQP--VTPKATTPTTTTAANVNC-----QLGGQQTVLFAYSNDLAPSVVLNTFSNSY 198

Query: 296 ASKELALXXCSRFHXQENXSLQYF 367
            +++L     SRF  ++  S+ YF
Sbjct: 199 LNEQLVTIAISRFDTRQPQSIMYF 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,009,978
Number of Sequences: 27780
Number of extensions: 175162
Number of successful extensions: 460
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)