Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1206
(449 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0) 127 4e-30
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 36 0.020
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 35 0.027
SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5) 32 0.25
SB_25421| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 30 1.0
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 29 1.3
SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_34202| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_34804| Best HMM Match : rve (HMM E-Value=1.2e-24) 28 3.1
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_32896| Best HMM Match : F5_F8_type_C (HMM E-Value=8.6e-17) 28 4.1
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 27 5.4
SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8) 27 5.4
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 27 5.4
SB_8252| Best HMM Match : rve (HMM E-Value=0.13) 27 5.4
SB_59069| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 27 7.2
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 27 7.2
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 27 7.2
SB_3585| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_56636| Best HMM Match : Toxin_4 (HMM E-Value=2.4) 27 9.5
SB_10758| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_45599| Best HMM Match : GRP (HMM E-Value=0.22) 27 9.5
SB_44405| Best HMM Match : Extensin_2 (HMM E-Value=4.5) 27 9.5
>SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0)
Length = 299
Score = 127 bits (307), Expect = 4e-30
Identities = 54/64 (84%), Positives = 60/64 (93%)
Frame = +1
Query: 256 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRA 435
SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WR+WH +VN++QRR
Sbjct: 60 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRKWHTKVNVQQRRF 119
Query: 436 ALAA 447
A+ +
Sbjct: 120 AVCS 123
Score = 74.5 bits (175), Expect = 4e-14
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = +2
Query: 77 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 256
ARP+++V++E E+ LP VFKAPIRPDLVN VH +++KN RQPY V+K AGHQT
Sbjct: 2 ARPVITVFNENGESA--GQTTLPAVFKAPIRPDLVNFVHSNIAKNKRQPYAVNKLAGHQT 59
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 35.5 bits (78), Expect = 0.020
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = +1
Query: 238 GGWSPNSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 399
GGW WG G+ + R GGG R G +G M GG P W R
Sbjct: 14 GGWGQGPGGGWGRGQG-GGMGRGPGGGWGRGSGGGWGRMQGGGMGRGPGGGWGR 66
Score = 27.5 bits (58), Expect = 5.4
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Frame = +1
Query: 238 GGWSPNSAESWGT--GRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 393
GG WG G + R P GGG R G +G M GG P + W
Sbjct: 54 GGMGRGPGGGWGRMQGGGMGRGP---GGGLGRGPGGGWGRMQEGGMGRGPGQGW 104
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 35.1 bits (77), Expect = 0.027
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = +1
Query: 238 GGWSPNSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 399
GGW WG G+ + R GGG R G +G M GG P W R
Sbjct: 258 GGWGQGPGGGWGRGQGRG-MGRGPGGGWGRGSGGGWGRMQGGGMGRGPGGGWGR 310
>SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)
Length = 612
Score = 31.9 bits (69), Expect = 0.25
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -2
Query: 364 HHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRH 257
HH CY H Y Y+ H H + + H YP RH
Sbjct: 20 HHYCCYCHH---RYCYYRHHHYCWYRHHYHYPCYRH 52
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 370 YVHHDTCYRRHPDRTYGYHHHGH 302
Y HH CY RH + Y HH H
Sbjct: 25 YCHHRYCYYRHHHYCW-YRHHYH 46
>SB_25421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 29.9 bits (64), Expect = 1.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 323 WVPPPRTRGIRATARPVPHD 264
W+PP RTR R T PV H+
Sbjct: 228 WMPPVRTRPARPTVMPVTHE 247
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 250 PNSAESWGTGRAVARIPR-VRGGGTHRSGQGAFGNMCRGGR 369
P +E +G ++ R PR RGGG G G G RGGR
Sbjct: 982 PTPSEPSSSGSSIVRRPRRRRGGGGGGGGGGGGGGGRRGGR 1022
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 364 HHDTCYRRHPDRTYGYHHHGHAEFGQQHVRY 272
HH RH R + +HHH H E+ ++H RY
Sbjct: 325 HHQRHRHRHRHR-HRHHHHHHHEYNRRH-RY 353
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -2
Query: 349 YRRHPDRTYGYHHHGHAEFGQQHVRYPMIRH 257
YR H + +HHH H Q+H RH
Sbjct: 307 YRYHHHHHHRHHHHHHHHHHQRHRHRHRHRH 337
>SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 373 TYVHHDTCYRRHPDRTYGYHHHGHA 299
TY H DT R+HPD H HA
Sbjct: 123 TYTHQDTQMRKHPDTQIYVHAPRHA 147
>SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 29.1 bits (62), Expect = 1.8
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 349 YRRHPDRTYGYHHHGHAEFGQQHVRYPMIRH 257
Y +HP T+ YHH H + ++ ++P + H
Sbjct: 413 YHQHPQLTHRYHHQ-HPQVIHRYHQHPQVTH 442
Score = 27.9 bits (59), Expect = 4.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 349 YRRHPDRTYGYHHHGHAEFGQQHVRYPMIRH 257
Y +HP T+ YH H + H ++P + H
Sbjct: 232 YHQHPQVTHRYHQHPQVTH-RYHQQHPQVTH 261
>SB_34202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 175 PGQ*CSRFYVQELEAALLREQG-GWSPNSAESWGTGRAVARIPRVRGGGT 321
P Q C + E+ +L G G P AE G ARI +RG GT
Sbjct: 596 PAQPCKHLHSYTFESNILGNTGTGGYPGFAERGGRASYQARIQDLRGKGT 645
>SB_34804| Best HMM Match : rve (HMM E-Value=1.2e-24)
Length = 1725
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +2
Query: 143 PFVFKAPIRPDLVNDVHVSMSKNSRQ--PYCVSKEAGHQTVPNHGVPDVLLP 292
PF F P+R +L+N++H+ ++ ++ + P+ G Q V N GV +P
Sbjct: 1264 PFYF--PLRLELINEIHLYITDDTGRTIPFLSGGFEGSQQVANPGVGLFTMP 1313
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 144 GRGLAAPCTVSLFSEYTDTKGRATDRLI 61
G+GL C+V+L S Y T+G+ RL+
Sbjct: 3163 GKGLTTWCSVNLDSVYLSTEGKEVYRLV 3190
>SB_32896| Best HMM Match : F5_F8_type_C (HMM E-Value=8.6e-17)
Length = 278
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -2
Query: 355 TCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHCLVTSLL 236
TC+ HP + Y H+ H F Q H + RH L TS L
Sbjct: 52 TCFPYHPHYHHHYRHNDH-YFHQDH----LYRHYLSTSAL 86
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 27.5 bits (58), Expect = 5.4
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -1
Query: 368 RPPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHD 264
RPP H + P PD WVP P R +P D
Sbjct: 250 RPPPHHDMRGP-PDQWVPGPEQRRDNMRGPGMPPD 283
>SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8)
Length = 193
Score = 27.5 bits (58), Expect = 5.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 364 HHDTCYRRHPDRTYGYHHH 308
HH YR H + Y +HHH
Sbjct: 96 HHHQHYRHHRHQHYRHHHH 114
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 364 HHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHCLVTSLL 236
HH + RH R + YHHH + H +P VT+++
Sbjct: 570 HHHLHHHRHHHRHHHYHHHHY----PHHHHHPCTIIIFVTTII 608
>SB_8252| Best HMM Match : rve (HMM E-Value=0.13)
Length = 264
Score = 27.5 bits (58), Expect = 5.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 370 YVHHDTCYRRHPDRTYGYHHHGH 302
Y HH +RR R + +HHH H
Sbjct: 233 YHHHHHHHRRRRRRRHHHHHHHH 255
>SB_59069| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -2
Query: 373 TYVHHDTCYRRHPDRTYGYHHHGHA 299
TY H DT +HPD H HA
Sbjct: 323 TYTHQDTQMHKHPDTQMYVHAPRHA 347
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 27.1 bits (57), Expect = 7.2
Identities = 8/31 (25%), Positives = 12/31 (38%)
Frame = -2
Query: 364 HHDTCYRRHPDRTYGYHHHGHAEFGQQHVRY 272
HH + H + +HHH H H +
Sbjct: 213 HHQHHHHHHHQHNHHHHHHNHHHHHHHHYHH 243
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 27.1 bits (57), Expect = 7.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 364 HHDTCYRRHPDRTYGYHHHGH 302
HH + RH DR + + HH H
Sbjct: 340 HHRNKHYRHHDRNHHHRHHHH 360
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 386 FVGANIRPPRHMLPKAP*PDLWVPPP 309
F G +RPPRH+ ++P P PPP
Sbjct: 321 FAGPTLRPPRHLPWQSPPPP---PPP 343
>SB_3585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 27.1 bits (57), Expect = 7.2
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -2
Query: 367 VHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHCLVTS-LLAHAVGLPRVLGHRN 194
+H+ T R+ + Y HH HA + R+ M + L T L HA P +L N
Sbjct: 1015 MHYYTLTTRYTIQ-YDTVHHVHASYNSHTARHTMHYYTLTTRYTLKHAYETPLILNDIN 1072
>SB_56636| Best HMM Match : Toxin_4 (HMM E-Value=2.4)
Length = 434
Score = 26.6 bits (56), Expect = 9.5
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 229 REQGGWSPNSAESWGTGRAVARIPRVRGGG 318
R + W P + +W +A+ P VR GG
Sbjct: 120 RPEAAWGPKRSGAWLGSQALVPQPAVRSGG 149
>SB_10758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 26.6 bits (56), Expect = 9.5
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 53 SSEMSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY-- 226
S +M L R + Y+E ++ + LP V AP+ D+V +V S K S + Y
Sbjct: 475 SPQMPLDFPRSFLEDYAEACANLK---QSLPQVHLAPLASDIVREVESSEVKLSLKFYVS 531
Query: 227 --CVSKEAGHQTV 259
C S EA +T+
Sbjct: 532 ENCPSVEAVVKTL 544
>SB_45599| Best HMM Match : GRP (HMM E-Value=0.22)
Length = 595
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 274 TGRAVARIPR-VRGGGTHRSGQGAFGNMCRGGR 369
+G ++ R PR RGGG G G G RGGR
Sbjct: 501 SGSSIVRRPRRRRGGGGGGGGGGGGGGGGRGGR 533
>SB_44405| Best HMM Match : Extensin_2 (HMM E-Value=4.5)
Length = 325
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 370 YVHHDTCYRRH-PDRTYGYHHHGHAEFGQQH 281
Y HH Y H P Y +HHH H + QQH
Sbjct: 297 YHHHHPPYHYHYPPLPYRHHHH-HNRY-QQH 325
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,128,446
Number of Sequences: 59808
Number of extensions: 311321
Number of successful extensions: 973
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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